Crassostrea angulata (Portugese oyster): 128186288
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Entry
128186288 CDS
T09348
Name
(RefSeq) uncharacterized protein LOC128186288
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128186288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128186288
03400 DNA repair and recombination proteins [BR:
canu03400
]
128186288
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128186288
Messenger RNA biogenesis [BR:
canu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
128186288
DNA repair and recombination proteins [BR:
canu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
128186288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
128186288
NCBI-ProteinID:
XP_052712041
EnsemblRapid:
LOC128186288
LinkDB
All DBs
Position
5:complement(29731553..29734275)
Genome browser
AA seq
447 aa
AA seq
DB search
MAAVNVKKIFEEVRPLYNFEFDLKDEQISVIESILEKKHTVGVFPTGFGKSVCFLLPPLI
LDQQKSDVRHVCIVISPLKSLMIDQCKQNFDHGIPAAVMKGMDEMSHEVIEGIKTGEYSI
LYMSPETLLNFESWGNIILNSSLYRDRVALIAIDETHILESWGDTFRPTFARLGELRSHF
PRTPFLMLTATCTQQILKHITSGIHLPGLKMFTASPDRPNIYLEYKRSKDIFEELGWLFN
DIKENGIKTRKTLVYVRSLSQGGRLYRDILGHLKEGAYFEQKKVQRNSHIALYHAGMATK
DLEYILHEISKPDSVIRLAVCTIAFGMGINIPDIDLVIHWGACSSVMDYWQEVGRAGRDG
RKAKAMYFVTPGSILHASDEMKELCSSLDKCRTKCFRDSILSYFIGYSSISQSLCKLNCI
ECECSQCSCCYLCQEACPCRMKAKNKN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtgaatgttaagaagatattcgaagaggttagaccactatataattttgaa
ttcgatcttaaagacgaacagatatctgtgatagagagtattttggaaaaaaagcatact
gtgggtgttttccctaccgggtttggcaaaagtgtatgttttttattgccccctttgatt
cttgatcaacagaagtcagacgttagacatgtttgcattgtcatatctcccttaaagagt
cttatgatagatcagtgcaagcagaattttgatcatggaattcctgctgccgtcatgaaa
ggcatggatgagatgagtcatgaggttattgaaggcataaagacaggtgaatattcaatt
ctatatatgtcaccagagacacttctaaatttcgagtcatggggaaacataatactcaat
tccagtttgtatcgtgacagagttgcactgattgccatagatgagacacacattttggag
tcctggggtgatacttttcgtccaacctttgcaagactcggagaacttcgctcccatttt
ccaagaactccattccttatgcttactgcaacctgcacacagcagattctgaagcacatc
acaagcggaattcacctacctggtctaaaaatgttcactgcatctcctgacagacctaac
atttacctggaatacaagaggtcaaaagatatttttgaagaacttgggtggctgtttaat
gatattaaagaaaatggtatcaaaaccaggaagactttagtatatgttaggagcttgagt
caaggtggccgcctttaccgggatatattgggccatttaaaagaaggtgcctattttgaa
caaaaaaaggttcagcgcaacagccacattgctttgtatcatgctggaatggctaccaaa
gatcttgagtacatactgcatgagatttcaaagccagacagtgtgatacgacttgcagtc
tgcactatcgcctttggtatggggatcaacatcccagacattgaccttgtcattcactgg
ggtgcatgtagctctgtaatggactattggcaggaggttggtagggcagggcgagatgga
cgcaaggcaaaggccatgtactttgtaacccctggatcaatacttcatgcttcagatgaa
atgaaggagttatgtagttcattggacaagtgcaggacaaagtgttttagggactctatt
ctctcttatttcattggatactcctctatatcacaatctctttgtaaactaaactgtatt
gaatgtgagtgttctcagtgcagttgttgttatctatgtcaagaagcttgtccgtgcagg
atgaaggccaaaaacaagaattag
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integrated database retrieval system
