Caldilinea aerophila: CLDAP_20060
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Entry
CLDAP_20060 CDS
T01797
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
cap
Caldilinea aerophila
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cap03036
]
CLDAP_20060 (smc)
Chromosome and associated proteins [BR:
cap03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CLDAP_20060 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
BAR_3_WASP_bdg
MukB
ABC_tran
BLOC1_2
AAA_13
AAA_27
Motif
Other DBs
NCBI-ProteinID:
BAM00046
UniProt:
I0I458
LinkDB
All DBs
Position
complement(2519193..2522858)
Genome browser
AA seq
1221 aa
AA seq
DB search
MRIKRVVIQGFKTFARRTEFIFDPGVTALVGPNGSGKSNIVDAIRWCLGEQSFSLLRSRK
TSDVIFSGSDKKSRLNLAEVTITLDNSQGEAPIDYAEIEITRRAYRDGDNEYLLNGQRVR
LQDIIDVLAPTGLGKRTYSVIGQGLIDRALSMAPEERRSLFEEAAGISGYQIKRATAVRR
LEATQQNLTRVRDILAELSPRLGYLRRQAERAREREQIARDLQALLREWYGYRWHTTLRM
VEQSHAAEAAQRREAAAIQQQLAAIGESIGQIRQAQNEARAHLASLHAESSALHRQAETT
GRELAVAQERLRQLQARREDATRELAPLDAQRAALSERLEELHRSVEKAENELREQMRLV
ETTQNAVGAQQEARSRLIAQQETLRQTLMQQQRRRAEIAGLLEQITERSAAVEAERSQQH
KALMEAERARSTAEAALAEAEAALQAIEQEAHTLQSELAALEAEISALQQEQRGAESARQ
EADRSLERLKTRRDLLQRLQREGAGYAGGVRAVLQAQASGRLHGILGTVAAQLRVPPHLD
KAIETALGAALQNIITQSWEDAAAAIELLKEQRSGRATFLPLDRLHVQPPIPAPKRPGIL
GVAVDLVDYAPAVEDAMQQLLNRVWVAETLAAARAALDEHRGSARPTVVTLEGEIIRPGG
AVTGGSEGNRGDDSLLARERELRELPDQIERAAALLHERAAACSKLAGEIETRRMEIARR
QQALADLARRERPLRGQLEELRRQLDRSLQMQRWRSEQMAQADTALQTLAERKAALDAEA
AELEQQEQASLQALSALEAELQAADADALLQELANRRAAVAEAQGHLRSQQALLESTQRT
LQDIETQMRNKQQQIAALDAEIEVLRRRIEDLTQVEEALSAQIEALQQRIVPIEQTLNRL
EAQQAEEEARERAQQQALRQAESRLNQALLQLQRSEDALQQLRGEIEADLGLVVLEESDD
VAYQPPLPWDAIVQQLPVVESVPESLEAEVREMRARLARLGGVNPEAPREYEEAAERYEF
LSTQSQDLESASADLQKVIKELDDRMEIELRRTYEAVGKEFTRLFQQLFNGGTAHLELTA
PENISQSGVEIIARPPGKRPQSLALLSGGERALAACALIFAILRVSPTPFCVLDEVDAAL
DEANVDRFRLTVEELSRDTQFIIVTHNRRTLEGANAIYGVTMGADGVSRVISLRLEGDRI
VKSEGASEAVDLRTFEEELQM
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaaacgagtcgtcatccaaggcttcaaaacctttgcgcgacgcaccgaattt
atcttcgaccctggcgtgaccgcactcgtggggccaaacggcagcggcaaaagcaacatc
gtagacgccatccgctggtgtttgggcgagcagagcttcagcctgctgcgctcgcgcaag
accagcgacgtgatcttctccggcagcgacaaaaagtcgcggctgaacctggccgaggtc
acgatcacgcttgacaacagccagggcgaagcgcccattgactacgccgaaattgagatc
acccgccgcgcctatcgagacggggacaacgaatacctgctcaacggccaacgcgtgcgc
ctgcaggacatcatcgacgtactggcgccgaccggcctgggcaagcgcacctactccgtg
atcggccaggggctgatcgaccgcgcgctgagcatggcgccggaggagcgccgctcgctc
ttcgaggaagcagccggcatcagcggctatcagatcaagcgtgccaccgccgtgcgtcga
ctggaagccacgcagcagaacctgacgcgcgtgcgcgacatccttgccgagctcagccca
cggctgggctatctgcgtcgccaggccgagcgcgcccgcgagcgcgagcaaattgcgcgc
gacctgcaggcgttgctgcgcgagtggtatggctatcgctggcatacgacgttacgcatg
gtggagcaatctcatgccgccgaggccgcgcagcgccgcgaagccgcagccatccaacaa
caactcgctgccattggtgagagcattgggcagatacggcaggcacagaatgaagcgcgc
gctcaccttgcaagccttcacgcagaaagtagtgcgcttcaccgtcaggccgagacaacc
ggccgcgagctggccgttgcccaggaacggctccgtcagttgcaggcgcgcagggaggac
gctacccgcgagctggcgccgctcgatgcacagcgcgcggcgttgagcgaacggctggag
gaactgcaccgcagcgtcgaaaaggccgagaacgagctgcgcgaacaaatgcgcctcgtc
gagacaacccaaaacgccgtcggggcgcagcaagaggcgcgcagccgcctgatcgcccag
caggagactctacgccaaacgctgatgcaacaacagcgacgccgtgcagaaatcgccgga
ctcctggaacagatcaccgagcgcagcgctgcagttgaagcagagcgcagccagcagcat
aaagcgctcatggaagcagaacgcgccagatccaccgccgaagcggcgctagctgaagcg
gaagcagcgctgcaggccatcgaacaggaggcgcacacgcttcaatctgaactcgctgcg
ctcgaagcggaaatctcggcgctccagcaggagcagcgcggcgctgaaagcgctcgccag
gaagccgaccgcagcctggagcgcctgaaaacccgccgtgacctgctgcagcgccttcaa
cgcgagggcgcgggctacgcaggaggcgtacgggccgtcttgcaggcgcaggcaagcgga
cggctgcacggcattctcggcaccgtcgctgcacaactgcgcgtgccgccgcatctggat
aaagccatcgagacggcgttgggcgcggccctgcagaacatcatcacgcaaagctgggag
gacgcagccgctgccatcgaactgctcaaggagcaacgcagtggccgcgccacctttctg
cccctcgaccggctgcatgtgcagccgcccattccggcgccgaaacgccccggcatactg
ggcgtcgccgtcgatctggtggactacgcgcctgccgtcgaagatgccatgcagcaactg
ctcaaccgcgtctgggtggcagagacgctcgccgccgcgcgcgctgcgctggacgagcat
cgaggcagcgcgcgaccgaccgtcgtgacgctggagggagagatcatccgcccgggcggc
gccgtgaccggcggcagcgaaggaaaccgcggggatgactctctgctggcgcgcgagcgc
gagctgcgcgagctgcctgatcagatcgaacgtgcagcggcgctcttgcacgaacgcgca
gcggcatgcagcaaacttgccggcgaaatcgaaacaagacgcatggagatcgcccggcga
cagcaggcgcttgccgatctggcgcggcgagagcgtcctctgcggggtcaactggaagag
ctgcgccgacaactggaccgcagcctgcagatgcaacgctggcgcagcgaacagatggcg
caggccgacacagcgctgcagacgctggctgaacgcaaggcggcgctggatgccgaggcg
gctgaactcgagcaacaggagcaggcaagcctgcaagcgctcagcgccctggaggcagag
cttcaggcggcagatgccgatgcgctgcttcaggagctggccaatcgccgcgccgctgtc
gccgaggcgcagggacatctgcgcagccaacaggcgttgctcgagtcaacgcagcgcacg
ctgcaagatatcgagacccagatgcgcaacaaacagcagcagatcgctgcgctcgacgcc
gaaatcgaggtgctacgccgccgtatcgaagacttaacccaggttgaagaggcgctcagc
gcccaaatcgaagccctgcagcaacgcattgtgccgatagagcaaacgttgaatcgtttg
gaagcgcaacaggcagaggaggaagcgcgtgaacgagcgcaacaacaggcgctgcgtcag
gcggagagccgcctcaaccaggcgctgctgcagttgcagcgcagcgaagacgccctgcaa
caacttcgcggcgagatcgaagccgacctggggctcgtcgtgctggaggagagcgatgac
gttgcctaccagcccccgctgccgtgggatgctatcgtgcagcaactgccggtggtcgaa
agcgtgcccgagtcgctggaggccgaggtgcgcgagatgcgcgcacggctggcccggctg
ggcggcgtgaatcccgaagccccacgcgagtacgaagaagcggcggaacgctacgagttt
ctttccacccaatcgcaggacctggagtctgcctccgccgacctgcagaaggtgatcaaa
gagctggatgaccgcatggagatcgaactgcggcgaacctatgaagcggtgggcaaagag
tttacacgcctctttcaacagctcttcaacggtggaaccgcccatctggagctgaccgct
ccggaaaacatcagccagagcggcgtggaaatcatcgcccggccgccggggaagcggccg
cagagcctggcgctgctctccggcggggagcgcgcgctggcggcctgcgctctgatcttc
gccatcctgcgcgtcagccctacacccttctgcgtgctggacgaagtcgatgcggcgctc
gatgaagccaacgtggatcgatttcgcctgaccgtggaagagctgagccgcgacacgcag
ttcatcatcgtaacgcacaaccgtcgcaccctggaaggcgccaacgcgatctatggggtc
accatgggcgccgatggggtgagccgcgtcatcagcctgcggctggagggcgaccgcatt
gtgaagtctgagggggcttcagaggcggttgatctgcgtacgttcgaggaagagcttcag
atgtag
DBGET
integrated database retrieval system
