Capnocytophaga sp. H4358: CGC49_09170
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Entry
CGC49_09170 CDS
T05519
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
caph
Capnocytophaga sp. H4358
Brite
KEGG Orthology (KO) [BR:
caph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caph03009
]
CGC49_09170
Enzymes [BR:
caph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CGC49_09170
Ribosome biogenesis [BR:
caph03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CGC49_09170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ATA73426
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Position
complement(2174468..2175610)
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AA seq
380 aa
AA seq
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MEKKYSSNNTNSQRSNNSYKKREYSNNSFQKKEYGNSERSSDKPYYTKKEYGSSERTYNK
KEYNSDRTKTNSGFKKSYNPNFKDTSNEGGYRKPYNPNFKDTSNEGGYKKSHNPNFKRNN
SYKKPFIKKNYNTEIEQQDNTLETGEIRLNKYIANAGICSRRNADIYIAAGNVEVNGQVM
TTLGYRVQPTDVVKFDGKVISSEKKEYILLNKPKGFITTTSDEKGRKTVMDLVANATTAR
ILPVGRLDRPTTGLLLLTNDGDLAKKLTHPTHGVRKIYHVVLDRKLDYKDFIKIEEGIEL
EDGFIQVDEISYVNDKPKNEIGVKIHSGRNRIVRRIFEHLGYEIEKLDRVVFAGLTKKDL
PRGHWRKLTQQEIINLRNIK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaatattccagtaataacactaactcacaacgtagcaataattcttacaaa
aagagagaatattcaaacaactcattccaaaagaaagaatatggaaactcggaacgctct
tctgacaaaccttactacactaaaaaagagtatggatcatcggagcgtacttacaacaaa
aaagaatacaattcagaccgaactaaaacaaacagcggtttcaaaaaatcgtacaatcca
aacttcaaagacacctccaacgaagggggatacagaaaaccgtacaatccaaatttcaaa
gatacttccaacgaaggggggtacaaaaaatcccacaatccgaatttcaaaagaaacaac
agttataaaaaaccgtttatcaaaaaaaattacaacaccgagattgaacaacaggacaac
actctagaaactggggagatacgcctgaataaatatatcgccaatgcaggaatctgttct
cgccgaaatgctgatatctacattgctgcgggaaatgtggaggtaaacggacaggtaatg
actacattaggatatcgtgtacaacctaccgatgtagtaaaattcgacggaaaagtgatt
tcttcggaaaagaaagaatacattttattaaacaaaccaaaaggatttatcaccactaca
agtgacgaaaaaggtcgtaaaactgtgatggatttagttgccaatgctactacggctcgt
attctgcctgttggacgtttggacagacctaccacaggacttttattactaactaatgac
ggtgatttagcaaaaaaattaacccatccaacacatggtgtacgaaaaatatatcacgtg
gttcttgaccgtaagttagactacaaagattttataaaaattgaagagggaattgaactt
gaggatgggtttattcaagtagatgaaatcagctatgtgaacgacaaacctaaaaatgaa
ataggtgttaaaattcacagcggaagaaaccgtattgtccgtcgtattttcgaacatctg
gggtatgaaattgaaaaattagaccgcgttgtgttcgctggacttactaaaaaagacctt
cctcggggacattggcgaaaattgactcaacaggaaattattaatttaagaaatataaag
taa
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