Capnocytophaga endodontalis: CBG49_04055
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Entry
CBG49_04055 CDS
T04940
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
capn
Capnocytophaga endodontalis
Pathway
capn00521
Streptomycin biosynthesis
capn00523
Polyketide sugar unit biosynthesis
capn00541
O-Antigen nucleotide sugar biosynthesis
capn01100
Metabolic pathways
capn01110
Biosynthesis of secondary metabolites
capn01250
Biosynthesis of nucleotide sugars
Module
capn_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CBG49_04055 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CBG49_04055 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CBG49_04055 (rfbC)
Enzymes [BR:
capn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CBG49_04055 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ASF42323
UniProt:
A0A1Z4BM26
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All DBs
Position
850748..851296
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AA seq
182 aa
AA seq
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MKVIKTKLEGVVIIEPQVFFDGRGYFFESFSQQRFNEQVAPITFVQDNESKSSYGVLRGL
HFQKPPFAQSKLVRVVKGKVLDVAVDLRKGSPTFGQYESVVLSEENKRQFFIPQGFAHGF
AVLSEEAIFQYKCDKYYAPHSEGSVRWNDPTIAIDWLLPEKDIILSTKDEQAPLLSQLTI
ND
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatcaaaactaaattagaaggtgtcgtgattatagaaccacaagtatttttt
gacggcagaggctattttttcgagtcgttttcacaacaacgcttcaacgagcaagtagcc
cccatcacatttgtgcaggacaacgaatcaaaatcaagttatggtgtattgcgcggcttg
cacttccaaaagccccctttcgcacaatctaaattagtacgagttgtgaaaggcaaagtg
ttagacgttgcggttgatttacgcaaaggttcacccacctttgggcaatacgaatcggta
gtgcttagcgaggaaaacaaacgacagttttttattccacaaggctttgctcacggtttt
gcagtgctcagtgaagaagctatttttcagtataaatgcgacaagtactacgcccctcac
agcgagggaagtgtgcgttggaacgaccctactatagccatagattggctattgcccgag
aaagacattatcctatcaacaaaagatgaacaagccccactcttatcacaattaacaatt
aacgattga
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