Corynebacterium aquatimens: CAQUA_01135
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Entry
CAQUA_01135 CDS
T09232
Symbol
rfbC
Name
(GenBank) putative dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
caqm
Corynebacterium aquatimens
Pathway
caqm00521
Streptomycin biosynthesis
caqm00523
Polyketide sugar unit biosynthesis
caqm00541
O-Antigen nucleotide sugar biosynthesis
caqm01100
Metabolic pathways
caqm01110
Biosynthesis of secondary metabolites
caqm01250
Biosynthesis of nucleotide sugars
Module
caqm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
caqm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CAQUA_01135 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CAQUA_01135 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CAQUA_01135 (rfbC)
Enzymes [BR:
caqm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CAQUA_01135 (rfbC)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CAQUA_01135 (rfbC)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
Motif
Other DBs
NCBI-ProteinID:
WJY64966
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All DBs
Position
complement(250212..251570)
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AA seq
452 aa
AA seq
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MTDSGISGLIVRPLNVHGDNRGWFKENWAGEPPMRVAQNNVSFNASRGATRGMHAEPWDK
YVSVATGRVWGAWVDLREGSPTFGATFGCEIGPDTAVFVPRGVANGFQALEDNTTYIYLC
SSRWSPDAQYSFSSYTEIDWPLEPTEVSDKDKGHPLLIDATPVPPRKVLVTGANGQLGRA
LQSLPGTEHWDFAGREELDVTGSVDKLRASRDWGQYSAIINAAAYNDVNGAETGEGRAGA
WAVNAVAPGKLAAIANEFGLTLVHVSTDFVFDGSVEVHPESEVPSPLSVYGASKSAGEAA
AMVAAQHFIVRTSWVFGDGANFVATMARLARGGVDPAVVRDQRGRPTWADDLAKGIVHLM
DTGAAYGIYNLSSGGDVVGRDELTMAVFAGVGEDPARVQPVTTEEWARISAANGTHEADR
PKESTLALDKIEATGFTPTNWRVALALYLADL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgactgattctggcatctcggggctgattgttcggccgctgaacgttcacggggacaac
cgcgggtggttcaaggagaactgggcgggcgagccgccgatgcgggtcgcgcagaacaac
gtcagtttcaatgccagccgcggggcgacgcgaggcatgcacgcggagccgtgggataaa
tacgtctctgtggccaccggacgcgtgtggggcgcgtgggttgacctgcgcgaaggctcc
cccaccttcggcgcgacgttcggctgtgagatcggtcccgacactgccgtattcgttccc
cgcggggtagccaacgggttccaggccctcgaggacaacacgacctatatctatctgtgc
agttcacggtggtcgccggatgcacagtactcattcagttcctacacggagatcgactgg
ccgctcgagcccacggaggtatcagacaaagacaaagggcaccccttgcttatcgacgct
acccccgtaccgcccagaaaagtcctcgtgaccggggctaacggccagcttggaagggca
cttcagtccctcccggggaccgaacactgggattttgcggggagggaggaattagatgta
acggggtccgtcgataagctgcgcgcttcgcgtgattggggacagtacagcgcgatcatt
aatgcggcggcgtacaacgacgtgaatggagcggagactggggaggggcgcgcgggggcg
tgggcggtcaacgccgtggcgccggggaaattggccgcgattgcgaatgagttcgggctc
actttggtgcacgtgagcaccgatttcgtattcgacggatcggtagaggttcacccggaa
tcagaggttccttcgccgttgtcggtgtatggggcgtcgaaaagcgccggcgaagcggcc
gcgatggtcgccgcacagcacttcatcgtgcggacctcgtgggtgtttggggacggcgcg
aacttcgttgcgacgatggcgcggctcgcgcgtggtggcgtcgatccggccgtggtgagg
gaccagcgagggcggccaacctgggccgatgacctggcgaaaggcatcgttcacctcatg
gacacgggcgcggcatacgggatctacaacctgtcgtctggcggcgatgttgtcgggcgc
gatgagctcacgatggccgtgttcgcaggcgttggcgaggatcctgcccgcgtgcagcca
gtgaccacggaagagtgggcgcggattagtgccgctaacggcacgcatgaggccgaccgt
ccgaaggaatcaacgttagcgctggacaaaatcgaggcaactgggttcacgcccacgaat
tggcgcgttgcgctggcgttgtatttggccgatttatag
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