Comamonas aquatica: KAQ61_10680
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Entry
KAQ61_10680 CDS
T07338
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
caqt
Comamonas aquatica
Brite
KEGG Orthology (KO) [BR:
caqt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caqt03009
]
KAQ61_10680
Enzymes [BR:
caqt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
KAQ61_10680
Ribosome biogenesis [BR:
caqt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KAQ61_10680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QTX19542
LinkDB
All DBs
Position
complement(2246716..2247975)
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AA seq
419 aa
AA seq
DB search
MEIMTKEHKPARRAPRSTERKPQVDRASAPEVTNAPQLVSTDVSNTESGYDFAAVIAGEL
DAAETQPESAMVKRVLKPEVESPKLHKVLAQAGLGSRLEMERMIVEGRITVNSEPAHVGQ
RIQLGDSIKVDGKPIKVRIDPPAVRVLAYHKPAGEVVTLDDPQNRPTVFRRLPKLHNGKW
QSVGRLDLNTEGLLLFTSSGTLANNLMHPRFGLEREYAVRVLGALTKEEKQLLTSGVQLE
DGEAAFGSIEDGGGEGANVWYRVTISEGRNREVRRMFEAVGRAVSRLIRIRYGAMQLPRG
LRRGAWMELDEQDVQALIQATGIAMAKPRKPVQQGSARRESDRAGSRAKARVTAAAEARE
LRARRKAKSAPKRTSNNDYQLPSVQPDPLKTSVGYIGHDSLARARAQAKRKPGARRGGR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcatgaccaaagaacacaagcctgctcgccgtgcgccacgcagcaccgagcgc
aagccacaggtggaccgtgcgtccgcgcccgaagtgacaaatgcccctcagctcgtttcg
acggatgtctcgaataccgaatctggctacgattttgcggccgtgattgccggggagctg
gatgcggccgagacgcagcccgagtccgcgatggtcaaacgcgtgctcaagcccgaggtg
gagtcgccgaagctgcacaaggtgctggcgcaggccggcctgggctcgcgcctggagatg
gagcgcatgattgtcgaggggcgtatcaccgtcaacagcgagccagcccacgtggggcag
cgcatccagttgggtgacagcatcaaggtggacggcaagcccatcaaggtgcgcatcgat
ccaccggctgtgcgcgtgctggcttaccacaagccggctggtgaagtggtgacgttggat
gatccgcaaaaccgccccaccgtgtttcgtcgtctgcccaagctgcacaacggcaagtgg
cagtcggtcggtcgcctggacttgaacaccgaaggcctgttgctgttcaccagctcgggc
accctggccaacaacctgatgcacccccgcttcggcctggagcgcgagtacgccgtgcgc
gtgctgggtgcgttgaccaaggaagaaaagcagctgctgaccagtggtgtgcagctggaa
gatggcgaggccgccttcggttccatcgaggatggcgggggtgagggcgccaatgtctgg
taccgcgtgaccatctccgaaggccgcaaccgtgaagtgcgtcgcatgttcgaagcggtg
gggcgcgccgtcagccgcctgatccgtatccgctacggcgccatgcagctgccccgcggc
ctgcgccgtggcgcctggatggagctggacgagcaggacgtgcaggccttgatccaggcc
accggcatcgccatggccaagccgcgcaagcctgtgcagcagggcagtgcgcgccgcgag
tcggatcgtgccggttcacgtgccaaggcccgggtgacagccgctgcagaggcgcgcgag
ctgcgtgcgcggcgcaaggccaagtccgcgcccaagcggaccagcaacaacgactaccaa
ttgccgtccgttcagccggatccgttgaagacctcggtcggctacatcggtcacgacagc
ctggcgcgtgctcgcgcacaggcgaagcgcaagcctggcgcgcggcgcggcgggcgctga
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