Carnobacterium sp. CP1: NY10_2216
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Entry
NY10_2216 CDS
T04230
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
carc
Carnobacterium sp. CP1
Pathway
carc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NY10_2216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carc02000
]
NY10_2216
Transporters [BR:
carc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NY10_2216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
AAA_29
nSTAND3
AAA_16
NB-ARC
AAA_22
AAA_23
T2SSE
AAA_18
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ALV22803
UniProt:
A0A0U3P591
LinkDB
All DBs
Position
complement(2312252..2314000)
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AA seq
582 aa
AA seq
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MRLFFTFLKKNKLLVLVTSSLILLQSVATLLIPYLIAQLIDKGILEKNSSVVYSIGIKML
LTVLVGAVVGVLGSYYASEIASRFGKETRKRLFRKIQQLSLNDTNKIGVASLVTRTSSDV
VNIQEVTLSLFQMVLPSPFMAIISILLAYRVSPVMTVIPLVSILIFISVITVIMFKSTRL
INNIQKKMDKMTMLVRQFFKGVKIIRAFDNADFEKNKVDGSFNDFADNMIRINKYFAFLT
PVAFSLNSLTMIPIIWVGSSLVAENSIQVGAITAVIGYSVLTMSSFIMTALIMFNIPRAI
ASLNRLQEVLVLQPEVEDEDHLVEKVDFTVQPALSFENVTFNYQGADKSVLEDLDFSINT
GEVLAIVGGTGSGKSTIAKILLRFNNIQAGRILIHGTDISKILQKDLRSLISYVPQRAFL
FSGTIRDNILDGNKAATPDEIRHAARVAQALPFIEEQDKKFNASVSQGGTNFSGGQKQRL
AIARALIKKSHIYVFDDSFSALDYKTDAKLRAALKPELKDAVTLIIAQRISTIIDADKII
VLNEGKIVGKGTHSELIEKNPVYQELARSQNMLSESEVKKDV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttattttttacatttctaaagaaaaacaaactgcttgtccttgttacaagcagc
ttaattttacttcaatcagtagcaactctacttattccttatctaatcgctcaacttatt
gataaaggaattttagaaaaaaatagtagtgtcgtttattctattggaatcaaaatgttg
cttactgtccttgttggagcagttgttggggtacttggaagttattacgcatctgaaatt
gcttcgcgttttggaaaagagacacgtaaaagactatttagaaagatacaacaattgtca
ttaaatgataccaacaaaataggagtggcttctttagtcacaagaacgtctagtgatgtt
gttaatattcaagaagtgacgttgtcattatttcaaatggttttgcctagtccatttatg
gccatcatttctatactactcgcttatcgggtttcacctgttatgacggtcattcctctt
gtatccattcttatttttataagcgtgattactgtgatcatgtttaaatcaacacggctt
atcaataacatacagaaaaagatggataaaatgaccatgcttgtaagacaattttttaaa
ggcgtaaagattattcgtgcctttgataatgctgactttgaaaaaaataaagttgatggt
agttttaatgattttgctgataacatgattagaatcaataagtactttgcctttctaaca
cctgttgcctttagcctgaattcattgactatgatcccgattatttgggtaggcagttct
ttagttgcagaaaacagtatccaagtaggggccattactgctgttatcggatactcagtc
ctcacaatgtcttcatttatcatgaccgctttgatcatgtttaatataccaagagcaata
gcttccttaaatagacttcaggaagtactggtccttcaaccagaagttgaggatgaggat
catttggtagaaaaagtagattttactgtacagccagccttgtcatttgaaaacgtaaca
tttaactatcaaggtgctgacaaatcggtattagaagacttagatttttcgattaacact
ggagaagtattagccatcgttggtggaacaggctccgggaaaagtacaatagctaaaatt
ctattgcgcttcaataacattcaagcgggacgtatcttgatacacggtacagatataagc
aaaatcttgcaaaaagaccttcgttcattgattagctacgtcccacaaagagcgtttcta
tttagcggaaccattcgggacaatattttagatgggaataaagcagcaacacctgacgaa
ataaggcatgctgcacgagttgcacaagccttaccctttatagaagaacaagataagaaa
tttaatgcttcagtttctcaaggaggaacaaatttttcaggaggacaaaagcaacgtctg
gcaattgctcgtgcattgataaagaaatctcacatctatgtatttgacgatagtttttca
gcactggattataaaaccgatgcgaaacttagagctgctttaaaacccgaactaaaagat
gctgtaacattgatcattgcccaaagaatcagtacaatcattgatgccgataaaatcatc
gtattaaatgagggtaaaatcgttggaaaaggcacccattctgaactaattgaaaaaaat
cctgtgtatcaagaattagctagatctcaaaatatgctatctgaaagcgaggtaaagaaa
gatgtctaa
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