Carnobacterium sp. CP1: NY10_2454
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Entry
NY10_2454 CDS
T04230
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
carc
Carnobacterium sp. CP1
Pathway
carc01501
beta-Lactam resistance
carc02010
ABC transporters
carc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NY10_2454
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NY10_2454
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NY10_2454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carc02000
]
NY10_2454
Transporters [BR:
carc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
NY10_2454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
ResIII
AAA_22
DUF87
TniB
AAA_16
AAA_29
FtsK_SpoIIIE
RNA_helicase
NACHT
Myosin_head
Mg_chelatase
AAA_7
nSTAND1
nSTAND3
ABC_ATPase
SLFN-g3_helicase
AAA_19
AAA_5
CbiA
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
ALV23038
UniProt:
A0A0U3NHK1
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All DBs
Position
2588167..2589261
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AA seq
364 aa
AA seq
DB search
MNNVLEVKNLNITFDTYAGKVKAIRGVSFNLKKGETLAIVGESGSGKSVTTRSIMRLLSQ
NANVEQGEILFNGSDLIKKTEKEMQGIRGKDIAMIFQDPMTSLNPTMTIGKQVSEPIRLH
QKLNKDEASKRALELLNLVGLPHAEKRMKQYPHQFSGGQRQRIVIAIALACNPEILIADE
PTTALDVTIQAQILDLMKELQKKISTSIIFITHDLGVVANVADRVAVMYAGKIVEVGTVD
EIFYNPQHPYTWGLISSMPTLEIKETLYAIPGTPPDLLDPPVGDAFAPRNEFAMKIDTEL
EPPLFKVSETHYAATWLLHPNAPAVEPPAEIKARQEIYKQKFSKHQHNEDSAVFDANHEV
KGGV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgtattagaagttaagaatttgaatatcacattcgacacctatgctggtaaa
gtaaaagccattcgtggtgtcagtttcaatttaaaaaaaggggagacattagctatcgtc
ggtgagtctggttctggtaaatccgtgacgactcgcagtattatgcgtttgctttctcaa
aacgctaatgttgagcaaggcgagattttgttcaatggcagcgacctaattaaaaaaacc
gaaaaagaaatgcaaggcatccgaggaaaggatatcgctatgattttccaagatccgatg
acgtcgcttaatccgacaatgacgattggaaaacaagtatctgaaccgattcgccttcat
caaaaattaaataaagatgaagcatctaagcgtgctctagaattgttaaatttggtaggg
ttgcctcatgctgaaaaacgtatgaaacaatacccgcatcaattttcaggtggacaaaga
caacgaatcgttattgcgattgccttagcttgtaatccggaaattttgatagctgatgaa
ccgacaacagctttagacgtaacaattcaagcgcaaattcttgatttgatgaaagaactg
caaaagaaaatttcaacttcgattatttttattacacatgatttaggcgtagtagctaac
gtagctgaccgcgtagcggttatgtatgctggaaaaatcgtagaagtaggaactgttgat
gagattttttataatccacaacacccatatacttggggattgattagttcaatgcctaca
ttagagatcaaagagacgctttatgcaatcccaggaacgcctccggacttactggatcca
cctgtaggagatgcttttgctcctcgtaacgagtttgcgatgaaaatcgatactgaatta
gaaccgcctttgtttaaagtttctgagactcattatgcagcaacttggttattgcaccct
aatgcaccagcagttgaaccacctgctgaaattaaagcacgtcaagaaatctataagcaa
aaattttcaaaacatcaacacaatgaagattcagccgtttttgatgctaaccatgaagta
aaaggaggcgtctaa
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