Collimonas arenae: LT85_4431
Help
Entry
LT85_4431 CDS
T03512
Symbol
pilR
Name
(GenBank) Type IV fimbriae expression regulatory protein PilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
care
Collimonas arenae
Pathway
care02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
care00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LT85_4431 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
care02022
]
LT85_4431 (pilR)
02035 Bacterial motility proteins [BR:
care02035
]
LT85_4431 (pilR)
Two-component system [BR:
care02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LT85_4431 (pilR)
Bacterial motility proteins [BR:
care02035
]
Pilus system
Twitching motility proteins
LT85_4431 (pilR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
HTH_50
AAA_16
AAA_19
HTH_28
AAA_22
FleQ
Motif
Other DBs
NCBI-ProteinID:
AIY43589
UniProt:
A0A0A1FIW2
LinkDB
All DBs
Position
complement(4971742..4973208)
Genome browser
AA seq
488 aa
AA seq
DB search
MTSPRILVVDDEAHLRELLEIALVKMGLDVDSADSLSAARSHLAANDYALVLTDMRLPDG
LGIELVREVTNGDKVIPIAVITAYGSADNAVVALKAGAFDYLSKPVALDQLRLMVQSALR
IGKPADSPRQPGDAKARSNTSLRLIGQSAAMQELRTQIVRLARSMAPVAITGESGSGKEL
AARDIHALSPRADKPFVAVNCGAIPEALMEAEFFGYRKGAFTGAADDREGFFQAANGGTL
LLDEVADLPLAMQVKLLRAIQERRVRKVGATVEEPVDVRLISATHQNLAECVESGRFRQD
LYYRLNVIELKLPPLRERLDDLGLLIDTVLGRLAAFAPQAVPVTLTPAAMAVLCSYAFPG
NVRELENILERALAFANDGVIEVADLGLKGGGNGRPLESQGMGDGEADAGLATLPASFAP
VAATTASLLSGSELPPSLPDYLDDIERDVIRRALTRTHFNRTKAADLLGISFRQLRYRMQ
RLSIHEQD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaccccgtattctggtcgttgacgacgaagcccatctgcgcgaattgttagag
atcgcattggtcaagatggggctggatgtcgacagtgccgacagcctgtccgcggcgcgc
agccatctcgcagccaacgactatgcactggtcctgaccgatatgcggttgccggacggt
ctcggcattgagctggtgcgcgaagtcaccaatggcgacaaggtgatcccgatcgccgtg
attaccgcctatggcagcgctgacaatgccgtggtcgcattgaaagccggcgccttcgac
tatttgtcgaaaccggtagcgttagatcagctacgtttgatggtgcagtcggcattgcgt
atcggtaagccggcagatagtccgcgccagccaggcgatgccaaagcacgtagcaatacc
tcattacgcctgatcggccaatctgccgcgatgcaggaattgcggacccagatcgtgcgt
ctggcgcgcagcatggcgccggtagccattaccggcgaatccggcagcggcaaggagttg
gcggcgcgcgatattcacgcgctcagcccgcgcgccgacaagccgtttgtagcggtcaat
tgcggcgccatcccggaagctctgatggaggctgaatttttcggctaccggaaaggcgcg
tttaccggcgccgccgatgaccgcgaaggatttttccaggctgccaacggcggcacgctg
ttgctggacgaggttgccgatctgccgctggcgatgcaggtcaagctattgcgggcgatt
caagagcggcgcgtgcgcaaggttggggcaacggtggaagagccggtggatgtccgtttg
atcagcgctacgcaccagaatctggccgagtgtgtcgaatcaggtagatttcgccaggat
ttgtactatcgtttgaatgttatcgaattaaaattgccgccgctgcgtgaacgtctggat
gatcttggtttactcatcgatacggtgttaggacgcttggcggcgtttgcaccgcaggcg
gtgccggtgacgttgacgccggcggccatggcggtgttgtgttcctatgcgtttccggga
aatgtgcgtgaactggaaaatattctggagcgtgcattggcgtttgccaatgatggcgtc
atcgaggtcgcagatctcggcttgaaggggggcggcaatggccgtccgttagagtctcaa
ggcatgggtgacggtgaggcggatgccggcctggcaactttgccggcaagcttcgcaccg
gttgcggcaactacggcatcgttattaagcggatccgaattaccgccgtcgctgccggat
tacctggatgatattgaacgcgatgtcatccggcgcgcactgacgcgcacgcattttaac
cggaccaaggcagccgatctgctgggtatcagctttcgccagctacgctatcggatgcag
cgtttatcgattcacgaacaggattag
DBGET
integrated database retrieval system
