Cygnus atratus (black swan): 118249848
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Entry
118249848 CDS
T09349
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118249848 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118249848 (USP47)
Enzymes [BR:
cata01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118249848 (USP47)
Peptidases and inhibitors [BR:
cata01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118249848 (USP47)
Ubiquitin system [BR:
cata04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118249848 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
118249848
NCBI-ProteinID:
XP_035406158
EnsemblRapid:
ENSACYG00000015730
LinkDB
All DBs
Position
5:complement(861046..912159)
Genome browser
AA seq
1373 aa
AA seq
DB search
MVPSEENQLVPKEDMFWSCRQSIFAEMKKKFSQVESAAEEPRVLCIIQDTTNSKTVNERV
TLNLPASTLLKKLFEDVASKVGYVNGTFDLVWGNGDNVTDTTPINQNSDKTILDAGFEPG
KKNFLHLTDKDGEQPHITSEESGTTDDCVQDRFIGPLPREGSVGCTSDYVSQSYSYSSVL
SKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDAVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSIF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKVGS
EKNSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLEAHEYPDHIKQLVQKERELEEQEKRQR
EIERNTCKIKLFCMHPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLDEAVPLDCCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQVFQCYKPGEVMVKVHV
VDLRTESVAPPISVRAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNVSSKT
LKAEGFFRSNKVFIESSESLDHHVAYTDSHLWKLLDRHANTIRLYVSLPEQSPGSQFRRS
VYQKPSGDSGNVDEASERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKST
EASDFENIESPSNEIDSSAENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDIL
SSSHSSDTLCNVDNAPIPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDES
GKSRGEAQYMYFKSEPYTADEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHFKV
FRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLL
DAVFAKGMTVRQSKEELLPQLREQCGLDLTTDRFRLRKKTWKNPGTVFLDYHIYEEDINI
SSNWEVFLEILDGVEKMKSMSQLAVLSRRWRPSEMKLDCFQEVVLESSSVEELKEKLSEI
SGIPLENIEFAKGRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTE
ELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagcgaggagaaccagctcgtccccaaagaggatatgttttggagttgcaga
cagagtatctttgctgaaatgaagaagaaattttcacaggtggaaagtgctgctgaggag
cccagagtgctgtgtataatacaagatacgacaaattcaaagacagtgaatgaacgtgtt
actttgaaccttccagcttccactctgcttaaaaagctgtttgaagatgtggcttcaaaa
gtgggctatgtgaatggaacctttgatttagtgtggggaaatggagataatgtaactgat
acgactccgataaatcagaacagtgacaaaactattcttgatgctggttttgagccaggg
aagaagaattttctacatttgacagacaaagatggtgagcaacctcatataacatcggag
gaatcaggtacaacagatgactgtgtgcaagacagatttataggcccacttccaagagaa
ggctctgttggctgtaccagtgattatgtcagtcaaagctattcatattcttcagtcctg
agcaaatcagagacaggctatgtgggtctagtaaatcaagcaatgacttgctacttgaac
agccttttacaaacacttttcatgactcctgaatttagaaatgcattatataaatgggaa
ttcgaagaatctgaagaggatgccgtgacaagtatcccataccagcttcaaaggctgttt
gttttactgcagaccagcaaaaaaagagcaattgaaacaacagatgttacacggagtttt
ggatgggatagcagtgaggcatggcagcaacatgatgtacaggagctttgtagagtcatg
tttgatgctttggagcagaaatggaagcaaacagaacaggccgatcttataaatcagctg
tatcaaggcaaactgaaagactatgtaaggtgtctagaatgtggctacgaaggctggaga
atcgacacttacttggatattcctttggtcatccgcccgtatggctccaaccaggcattt
gctagcgtggaagaagcactgcatgctttcattcagcctgagattcttgatggccccaat
cagtatttttgtgagcggtgtaagaagaaatgtgatgcaaggaagggcctgcggttcttg
cattttccatatctgctgacattacagctgaagagatttgactttgattacaccactatg
cacagaattaaactcaatgatcgtatgacatttcctgaggagttagacatgagtattttc
attgatgtcgaagatgagaaatctcctcagactgaaagttgcactgatagtggagcagaa
aatgaaggcagttgtcacagtgatcagatgagcaatgatttttctaatgatgatggagtt
gatgaaggaatatgccttgaaagcaatagtgcagcagaaagaatttctaaagttggcagt
gaaaagaattctctactgtatgagctcttttctgttatggttcattctggaagtgctgct
ggtggccattactatgcctgtataaaatcatttagtgatgaccaatggtacagttttaat
gatcagcatgttagcaagataactcaggaagatattaagaaaacatatggtggatcttct
ggaagcagaggctattattccagtgcttttgccagctccacaaatgcgtacatgctaata
tatagactgaaggatccagcaagaaatgcaaagtttcttgaggcacatgagtatccagac
cacattaaacaattagtacagaaagagagagaactggaagaacaagaaaagaggcaacgg
gaaattgagcgcaacacttgcaagattaaattgttctgtatgcatcctacaaaacaaata
atgatggagaacaaattagaggttcataaggacaggacactgaaggaagctgtggaaata
gcttacaagctaatggatttagacgaggctgtccctttagattgctgtcgtcttgtcaaa
tatgatgagttccatgactacttggaacgatcgtatgaaggagaagaggatacaccaatg
ggtttattacttggaggtgtcaaatcaacgtacatgtttgacttactattggaaacaaga
agacctgaccaagttttccagtgctataaacctggtgaggtcatggtaaaggttcatgta
gttgacctaaggactgaatctgttgctcctccaataagtgtacgagcatatttgaatcaa
accgtttcagaatttaaacagctaatttcaaaggctacacacctgcctgctgaaacaatg
cgggtagtattagaacgttgctacaatgacttgcgtcttctgaatgtttccagcaaaaca
ctgaaagctgaaggcttttttagaagcaacaaggtatttattgaaagctcggagtcatta
gatcatcatgtggcatatacagattctcatttatggaaacttttggatcgtcatgcaaat
acaatcagactatatgtttcattaccagagcagtctcctggatctcagtttagacgatca
gtttatcagaagcctagtggagattcaggcaacgtggatgaagcctctgaaagagtaaaa
ggacctgtaggcaacatgaaatctgtagaagcgattctggaagaaagcactgaaaagctt
aaaagtttgtccctgcagcagcagcaggaaggtgataatggagacagcagcaaaagcaca
gaagccagtgattttgaaaatattgaatcaccttcaaatgaaatagactcatcagcagaa
aacagagaacttgaaaaccaaattcagatttctgatccagaaaatctccagtctgaggaa
cggtcagattcggatgtaaataatgataggagtacaagttcagtagacagtgatatcctt
agctctagtcatagtagtgatactttatgcaatgtggacaatgccccaattcccttggct
aatggacttgattctcatagtatcacaagtagtaggagatcaaaagcaaatcaggggaag
aaagaaacctgggacacagcagaagaagattccggaacagacagtgaatacgatgaaagt
ggcaagagtagaggagaagcacaatatatgtactttaagtcagaaccctacactgcagat
gaaggttcaggagaagggcaaaaatggttgatggtacacgttgataaaagaattacactg
tctgccttcaagcaacatttggagccctttgttggagtaccatcctctcacttcaaagtc
tttagagtctatgccagcaatcaagagtttgagagtgttcggctcaatgagaccctttca
tcgttttctgatgacaataagataactattagacttggaagagcccttaagaaaggtgaa
tacagagtcaaagtctatcagcttttggtaaatgaaccagagccatgcaagtttcttcta
gatgcggtttttgctaaaggaatgactgtccgacagtcaaaagaggagctgcttcctcag
cttcgagaacagtgtggcctggacttaacgactgacaggtttcgtctacgaaagaaaacc
tggaagaacccaggcactgtgtttctggattatcatatctatgaagaagatatcaatatt
tcaagcaattgggaggtcttcctagaaatacttgatggagtagaaaagatgaaatccatg
tcacagcttgcagttttatcaagacgatggagaccatcagagatgaaactagattgtttc
caggaagtcgtgctagaaagcagcagtgttgaggaattaaaagagaagctgagtgaaata
agtggaatacccttggaaaatatagagtttgcaaagggtagaggaacgtttccatgtgac
atttccatactagagattcaccaggatttggactggaatcctaaagtatcaacattgaat
gtctggcctctgtacatttgtgatgatggtgcagtaatattttatagggataaaactgaa
gaattaatggaattaacagatgaacagagaaatgaactgatgaaaaaagaaagcagcagg
ctccagaaaactggacaccgcgtaacctactctcctcgtaaagagaaagcactaaaaata
tatctggatggagcaccaaataaagatttgactcaagactga
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integrated database retrieval system
