Cygnus atratus (black swan): 118255041
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Entry
118255041 CDS
T09349
Symbol
TSR1
Name
(RefSeq) LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cata03009
]
118255041 (TSR1)
Ribosome biogenesis [BR:
cata03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
118255041 (TSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Motif
Other DBs
NCBI-GeneID:
118255041
NCBI-ProteinID:
XP_035416821
EnsemblRapid:
ENSACYG00000015052
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Position
20:complement(6694111..6700786)
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AA seq
804 aa
AA seq
DB search
MAGAHRAGPLKQQNKAHKGGRHRGAARRRAAGRVPVKAQSRRQRRELGRADRRHQALQLR
RQRKDAVLAEKRSLGSRDGPPHLVVVVPLHGRAAARDALRLLQSQDSAVLRVDEGKAGGF
ALLCPQLKQRWRFVAAQTGDLHAVLDLAKVADSLLFILDPADGWDSAGEYCLSCLFAQGL
PSYALAVPGGTDLPPKKRIDAKKKLSKVIEKRFPEAKLFSLNTEQESSLLLRHLATQKQR
HLAFRDRRAHLLAYAAEFVPSQESDQVGTLKVSGFVRGQTLDVNGLVHIVGHGDFQMSQL
DAPPDPLSLNPRVVKGQKTTQGMDVQEDSANGTDEMEEDVKLLVKADTSKQESLQSEVVP
DPMEGEQTWPTEEELQEAEASQKANRRVVKVPKGTSKYQAAWIVDDEEGSDEDGDVDDDI
DDDMMEEAASQEGESSAEEEELAEEECETVTVSECVRDDQYDEKVEEDEQMLEKFKQERM
DEMFPDEVDTPRDVPARVRFQKYRGLKSFRTSPWDPKENLPWDYARIFQFQDFFRTRKHL
FRQIEKEEAEGALVGWYVTVHVCNVPVGVVESFREGKPLVLFALLPHEQKMSVLNFLVRR
HPTSSEPVRAKEELVFHCGFRRFRASPLFSQHTSADKHKLERFLRPDAALVVTVYAPITF
PPASVLLFQQRSNGMHDLIATGSLLAVDPDRIIIKRLVLSGHPFKILTKTAVVRYMFFNR
EDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCHFDGQLKSQDTVLLNLYKRVFPKWTYD
PYVPEPVPWVRSESALPVQEVEME
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgcaccgggccgggccgctgaagcagcagaacaaggcgcacaagggcggc
aggcaccgcggggccgcgcggcgcagggccgcgggcagagtccccgtgaaggcccagagc
cgccggcagcgccgcgagctgggcagggcggaccggcggcaccaggccctgcagctccgc
cggcagcgcaaggatgcggtgctggcggagaagcggagtttgggcagcagggatgggccc
ccgcacctcgtggttgtggtgccgctgcacggcagggctgcagcacgcgacgccctccgc
ttgctgcagagccaggactcggctgttctccgcgtggacgaggggaaggctgggggcttc
gcgctcctctgcccccagctcaagcagcgctggcggtttgtggcagcacagacaggggat
ctgcacgctgtcttagacctagcaaaagttgccgactccctcctgttcatcttggatcct
gcggatggctgggacagcgcaggggagtactgcctctcctgcctcttcgcacaggggctc
cccagttacgctcttgctgtgccggggggcactgacttgccgccgaagaagcggatagac
gccaagaagaaactttccaaagtcatcgagaagcggtttccagaggccaagctcttctcc
ctgaacacagagcaggagtcctcgctgctgctgaggcacctcgccacgcagaagcagcgg
caccttgcttttcgggacaggcgggctcacctccttgcctacgctgccgaattcgtgccc
agtcaggagagcgaccaggtcgggaccttgaaggtgtccggctttgtccggggacagacc
ctggacgtgaacggcctggtgcatattgtggggcacggagacttccagatgagccagctg
gatgcgccccccgatcccctctctttgaacccccgagtggttaagggacagaagacgacg
cagggcatggatgtgcaggaggactctgcgaacggtactgatgagatggaggaagatgta
aagctcctggtgaaggcggacacgagcaagcaggagtctttgcagtcagaagtggttcct
gaccccatggaaggggagcagacgtggccaactgaagaagagctgcaggaagcagaggct
tctcagaaggcaaacaggagggtggtgaaggtccccaaaggcacatccaagtaccaggct
gcgtggatcgtggatgacgaagagggcagtgatgaagacggtgacgtcgatgatgacatc
gatgatgatatgatggaagaggcagcttcccaggagggggagagcagcgcggaggaagag
gaactcgcagaggaggagtgtgagaccgtgaccgtgtccgagtgcgtgcgggacgaccag
tacgatgagaaggtggaggaagatgagcagatgctggagaaattcaaacaggagagaatg
gatgagatgttcccggacgaggtggacacgccgcgtgatgtgcctgccagagtccggttc
cagaagtacagagggctcaagagcttcaggacttctccgtgggaccccaaagaaaacctc
ccatgggactacgcaaggattttccagttccaggacttcttccgcaccaggaagcacctc
ttccggcagatagagaaagaggaggccgaaggagctttggttggctggtacgttacggtt
cacgtctgcaacgtccctgttggggtggtggagagcttcagagaagggaagccgctagtc
ctctttgccctgcttcctcacgagcaaaagatgtctgtgctgaatttcctggtgcggcgg
catccaaccagcagcgagccggtgagagcgaaggaggagctcgtcttccactgcgggttc
aggcgcttccgagcatcccccctgttctcgcagcacacctcagccgacaagcacaagctg
gagcgtttcctgcgcccggatgctgccctggtggtgactgtgtatgctcccatcactttc
cctcctgcctcagtgcttctttttcaacagagaagtaacggaatgcacgacctcatcgcc
acgggctccctgctggctgtggacccggacagaatcatcatcaagcggctggtgctcagc
ggccaccctttcaagatcttgaccaagacggctgtggtgcgatacatgttctttaacaga
gaggacgtgatgtggtttaagccagtggagctgaggacaaaatggggtcgtcggggacac
atcaaggagccattaggtacccatgggcacatgaagtgccacttcgacggccagctgaag
tcccaggacaccgtgctgctgaacctctacaagcgggttttccccaaatggacttacgat
ccctacgtcccggagcctgtgccctgggtgaggagtgagagcgcgctgcccgtgcaggag
gtggaaatggaatga
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