Cygnus atratus (black swan): 118256943
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Entry
118256943 CDS
T09349
Name
(RefSeq) biotin-dependent 3-methylcrotonyl-coenzyme A carboxylase beta1 subunit-like isoform X1
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata00280
Valine, leucine and isoleucine degradation
cata01100
Metabolic pathways
Module
cata_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
118256943
Enzymes [BR:
cata01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
118256943
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Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
Motif
Other DBs
NCBI-GeneID:
118256943
NCBI-ProteinID:
XP_035420283
EnsemblRapid:
ENSACYG00000006217
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Position
8:31494037..31507657
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AA seq
622 aa
AA seq
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MLFLLSLIPRVMWNNITFCSICKLSPNSTPLLLPRFLTLNHVFKGKCKGFFSNSKQSTQT
LQNEGLKRTCSMLPSRLVSSKAKYRRYAKTYPVLDGRVLSVYRHVFEENLRNSEAVVKRY
SELLELVSKGGGENAILRHTQRNKKLFVRERLKFLLDDESFLELSPLAGLNMPYGDVPAA
GCLTGIGKICGVWCVFTANDATVKGGTIYPIGVKKQLRAQEIAMQNRLLSVYLVDSGGAF
LPLQSELFPDKSHGGRIFYNEAIMSAMKIPQVAVVCGSCVAGGAYVPTMAEEAVIIDKIG
TLFLAGPPLVKAATGEYVSPEDLGGAKLHSKVSGCSDHFASSEKEAYECVRNVVSTLNYE
PLPDEVIEHDGPLYSSDELLGLAPRDYRCTLPVKLILSRLLDGSRFQEFKADYGITLVTG
FGHVEGHLVGVVANNGELTHDASLKGSHFVQLCSHRSIPILFFQNTAPHAAEPTSISRAE
AHSNRLKAQASMMAAVACAAVPKITIVIGGCYGSESYVMCGRSFSPNFLFLWPNARVALV
DSRHLTAVPQAGDSDSTDESELKHLKQRLEEESSAFYSSARLWDDGIILPQNTRKVIAQC
LQIIQQQKYQVIPLYQHPVIRM
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttcttctctctttaattcctagggtcatgtggaacaatatcactttctgctcc
atttgcaaactctcccctaactccacaccattgctgcttcccagattcctgactttaaac
catgtgttcaaaggaaagtgtaagggcttcttcagtaacagtaaacaatcaacacagaca
ctgcaaaacgaagggctgaaaaggacatgcagcatgcttcccagccgtttagtaagtagc
aaagcaaaatatagacggtatgcaaaaacttaccctgttttagatggacgcgtcctgtcc
gtatatcgacatgtgtttgaagaaaatttaaggaacagtgaggctgttgttaaaagatac
tcagaattgctagagttggtcagtaaaggagggggagagaatgccatcttgcgtcatact
cagagaaacaagaagctgtttgttcgtgaacgcctgaagtttcttcttgatgatgagtct
tttctcgaactgtctcctctcgcaggcctcaatatgccttatggtgatgttcctgcggct
ggatgccttactggaattggaaaaatctgtggggtttggtgcgtcttcacggcaaatgat
gcaactgtaaagggaggaactatttatccaattggagtgaagaaacagctaagagctcag
gaaatagccatgcagaacagactgctgtctgtgtaccttgttgacagcgggggagcgttc
ctaccacttcagtcagagctgtttcctgacaagtcacacggtggcagaattttctacaac
gaagcaataatgtctgctatgaaaatccctcaggtggcagtagtgtgtggctcctgcgta
gctggaggtgcctatgttccaaccatggccgaagaagctgtgattatagataaaatcggc
actctgttccttgctggcccacccctggtaaaagctgctactggagaatatgtctctcct
gaggacctaggaggagcgaaacttcactctaaagtcagtggctgcagtgaccattttgca
tcttcagaaaaggaagcctatgagtgtgttcgaaatgttgtctcaacgctgaattacgag
cctctgccggatgaggtcatagaacatgacggtcctctgtatagctctgacgagctcttg
gggcttgcaccacgggattataggtgtactcttcctgtgaaattgattctgagccgtctg
ctggatggaagcagattccaggaattcaaggctgactatggaataacattagtgacagga
tttggccacgtggaagggcacttggtgggagtggtggcaaacaatggggagcttactcat
gatgcttctctcaagggcagccatttcgtacagctgtgcagtcaccggagcattcccatc
ctctttttccaaaacactgctccccatgcagcagagccaacaagcatctcgcgggcagag
gctcactccaacagattaaaagcccaggcctccatgatggctgccgttgcctgtgctgct
gttcccaaaataaccatagtaattggtggctgttacgggagcgaaagttatgttatgtgc
gggagatcattcagtccaaattttctcttcttgtggcctaatgcaagagttgctcttgtg
gattcaagacatttgaccgcagtcccacaagctggggacagtgatagtacagatgaatca
gagctaaaacatctgaaacaaaggctagaggaagaaagcagtgcattttattcttctgcc
agactctgggacgatggtataattctacctcaaaatactagaaaggtaattgcacagtgc
ttacaaatcatacaacagcagaagtaccaggtcatacctctgtatcagcatcctgtcatc
aggatgtaa
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