Catellatospora sp. IY07-71: CS0771_24630
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Entry
CS0771_24630 CDS
T07191
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cati
Catellatospora sp. IY07-71
Pathway
cati03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CS0771_24630 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cati03019
]
CS0771_24630 (rny)
Messenger RNA biogenesis [BR:
cati03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CS0771_24630 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
BCJ72919
UniProt:
A0A810NLQ8
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Position
2740647..2742503
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AA seq
618 aa
AA seq
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MTPMEGALLAAIIVLALLVAGMLALGVRLMRRLSAPTAPTGLPLSVIVDDPEAVAERERQ
RQTLTELQNSVSDAQAALENERRSVASARAEATAVRAENAAAKAEVATARAEAQRVLDGA
HAEADTVLQRAHRQAEEDAEQVRATARRTGEREIAMLTSTAKEQAAEAERRLQRLDERER
LHTAEAERLAERERQHVEEAERLAERDRRIAAAQAELAKWEAALQAKEQELAQAQEQRRK
ELERVAGLTADAAKHELVESIEVQAKREAALLVRDIENDARATGEQRARHIVVDAIQRVA
SEQTAESVVSVLHLPSDEMKGRIIGREGRNIRAFETVTGVNLIIDDTPEAVLLSCFDPVR
REVGRLTLEKLVLDGRIHPHRIEEVYDVARFEVERMCQRAAEDALVEVGITDIHPELVTL
LGRLRYRTSYGQNVLKHLVETAHIAGIMASELKLDPDLIKRSAFLHDIGKALTHEVEGSH
ALIGADVARRFGESDEVVHAIEAHHNEVQPQTIEAVLTQASDACSGGRPGARRESLEAYV
KRLERIEEIAGAKSGVDKVFAMQAGREIRVMVRPEEVDEIGAAVLARDVAKQIEEELTYP
GQIRITVVRESRTTEIAR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgatggaaggggcgctgctcgcggcgatcatcgtcctcgccctcctggtcgcg
gggatgctggcgctgggcgtacggctgatgcgccgcctgagcgcccccaccgcaccgacc
ggcctgccgctgagtgtgatcgtcgacgacccggaggcggtggccgagcgcgagcgccag
cgccagaccctcaccgagctgcagaactccgtctccgacgcgcaggccgcgctggagaac
gagcgccgttccgtggcgtcggcccgcgccgaggcgaccgccgtacgagccgagaacgcc
gcggccaaggccgaggtcgccacggcccgcgccgaggcgcagcgggtgctggacggggcg
cacgccgaggccgacaccgtgctgcagcgggcgcaccgccaggcggaggaggacgccgag
caggtccgggccaccgcccggcgcaccggcgaacgcgagatcgcgatgctcacctccacc
gccaaggagcaggccgccgaggccgagcgccggctgcagcggctggacgagcgggagcgg
ctgcacacggccgaggccgagcggctggccgagcgggagcgccagcacgtcgaggaggcc
gagcgcctcgccgagcgggaccggcgcatcgccgcggcccaggccgagctggccaagtgg
gaggcggctctgcaggccaaggagcaggagctggcccaggcccaggagcagcgccgcaag
gagctggaacgggtcgccgggctgaccgcggacgcggccaagcacgagctggtggagagc
atcgaggtgcaggccaagcgcgaggcggcgctgctggtccgcgacatcgagaacgacgcc
cgcgccaccggcgagcagcgggcccggcacatcgtggtcgacgcgatccagcgggtggcc
agcgagcagaccgccgagagcgtggtcagcgtgctgcacctgcccagcgacgagatgaag
ggccggatcatcggccgcgagggccgcaacatccgggccttcgagacggtcaccggggtc
aacctgatcatcgacgacacccccgaggcggtgctgctgagctgcttcgacccggtgcgc
cgggaggtcggccggctcaccctggagaagctggtgctcgacgggcggatccacccgcac
cgcatcgaggaggtctacgacgtcgcccggttcgaggtggagcggatgtgccagcgcgct
gcggaggacgcgctggtcgaggtcggcatcaccgacatccacccggagctggtgaccctg
ctgggccggctgcgctaccggacgtcgtacgggcagaacgtgctcaagcacctggtggag
accgcgcacatcgcggggatcatggcgtcggagctgaagctggacccggatctgatcaag
cgctcggcgttcctgcacgacatcggcaaggcgctcacccacgaggtggagggttcgcac
gcgctcatcggcgcggacgtggcccgccgcttcggcgagagcgacgaggtggtgcacgcg
atcgaggcgcaccacaacgaggtgcagccgcagaccatcgaggcggtgctcacccaggcg
tcggacgcctgctcgggcgggcggccgggggcgcggcgggagtcgctggaggcgtacgtc
aagcggctggagcgcatcgaggagatcgccggggccaagagcggcgtggacaaggtgttc
gcgatgcaggccggccgggagatccgggtgatggtgcgcccggaggaggtcgacgagatc
ggggccgcggtgctggcccgggacgtggccaagcagatcgaggaggagctgacctacccc
ggccagatccgcatcacggtcgtccgcgagtcccgcaccaccgagatcgcccgctga
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