Corynebacterium atrinae: CATRI_01385
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Entry
CATRI_01385 CDS
T09346
Symbol
rfbC
Name
(GenBank) putative dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
catr
Corynebacterium atrinae
Pathway
catr00521
Streptomycin biosynthesis
catr00523
Polyketide sugar unit biosynthesis
catr00541
O-Antigen nucleotide sugar biosynthesis
catr01100
Metabolic pathways
catr01110
Biosynthesis of secondary metabolites
catr01250
Biosynthesis of nucleotide sugars
Module
catr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CATRI_01385 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CATRI_01385 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CATRI_01385 (rfbC)
Enzymes [BR:
catr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CATRI_01385 (rfbC)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CATRI_01385 (rfbC)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
WJY62390
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All DBs
Position
complement(268788..270128)
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AA seq
446 aa
AA seq
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MRVHHTPIEGLLIIDLDVRGDNRGWFKENWQREKMLAAGLPDFRPVQSNVSFNAKRGVTR
GLHAEPWDKLVSVATGRVHGAWCDLREGSPTYGQTHEVEINPATGVFVPRGVANGFQALE
DATTYIYLVNDHWSPQGNYANVNLDLINWPLEPTEISGKDRSHPSLIDASPLPPRRVLVT
GADGQVGRALRRVLPDAQFCTRAELDITNPPERPWRQYSAIINAAAYTDVDQAETDRARA
WQVNAEGPMKLARIATDNNLTLVHLSSDYVFDGATSRPYLETDPVSPLGVYGQSKAAGDL
AVATCPRHYIVRTGWVVGEGKNFVDTMAQLAAKGVEPHVVNDQRGRPTFADDLAAGIVHL
LATTPAYGTYNLSNSGDEVAWDELARETFTLLGHDPGAVHPVSTRLYFEGRPHAPRPSIS
TLDLTKIEATGFAPRPWRDGLARYLS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttcatcacacgcccatcgaggggctgctgattattgacctcgacgtccgcggc
gataaccgcggatggttcaaggagaattggcagcgggagaagatgcttgccgccgggctg
cctgatttccggccggtccaaagcaacgtctccttcaacgccaagcgcggcgtcacccgc
ggtctgcacgcggagccctgggacaagctggtctcggtggccacgggccgggtccacggc
gcgtggtgcgatttgcgcgagggctcgccgacctatggccagacccacgaggtcgagatc
aatcccgcgacgggcgtgttcgtgccccgcggcgtggccaacggcttccaggccctcgag
gacgccacgacctacatttacctggtcaacgaccattggtcaccgcagggtaactacgcc
aacgtcaacctcgacctcatcaattggccgctggagccgacggaaatctccggcaaggac
cgaagccacccttcgcttatcgacgcctcccccctcccgccccgccgcgtcctcgtcacc
ggggccgacgggcaggtcggccgcgccctgcggcgcgtcctcccggacgcgcagttttgt
acgagggcggaactcgacatcaccaatcccccggagcggccgtggcggcagtactccgcg
atcatcaacgctgccgcctataccgacgtcgaccaggccgaaaccgaccgagcccgcgcc
tggcaggtcaatgccgagggaccgatgaagctcgcgcgcatcgccaccgacaacaacctc
accctggtgcacctctcctccgactacgtcttcgatggcgctacttcgcggccctacctt
gaaaccgatccggtgagcccgctcggggtgtacgggcagtccaaggccgccggtgacctc
gccgtggccacctgcccgcgccactacatcgtccgcaccggctgggtcgtgggcgaaggc
aaaaacttcgtggacaccatggcgcagctcgcggccaagggcgtcgaacctcacgtggtc
aacgaccaacgcgggcgccccaccttcgccgacgacctcgccgccggaatcgtccacctc
ctggccaccacccctgcgtacggaacctacaacctcagcaattccggcgacgaagtcgcc
tgggacgagctcgcccgagagactttcaccctcctcggccacgacccgggtgccgtgcac
ccggtgagcacgaggctgtactttgagggacgaccgcatgccccgcggccgtcgataagc
actctcgatctgacgaagatcgaagcaacggggtttgctccccgcccgtggcgcgacggc
ctggcacgatatctgtcatga
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