Cercocebus atys (sooty mangabey): 105591412
Help
Entry
105591412 CDS
T07242
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105591412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caty03041
]
105591412
Enzymes [BR:
caty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105591412
Spliceosome [BR:
caty03041
]
Complex A
U2 snRNP components
U2 related factors
105591412
Complex B
105591412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
105591412
NCBI-ProteinID:
XP_011927500
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MECSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYERFRKNFYVEVPELAKMSQEEVN
VFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPGIMSGRD
LIGIAKTGSGKTIAFLLPMFRHIMGQRSLEEGEGPVAVIMTPTGELALQITKECKKFSKT
LGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRVIDMLAANSGRVTNLRRLTYVVLDEA
DRMFDMGFEPQVMRFVDNVRPDRQTVMFSATFPGAMEALASRILSKPIEVQVGGTSVVCS
DVEQQVIIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLH
GGIDQYDRDSIINDFKNGTCKLVATSVVARGLDVKHLILVVNYSCPNHYEDYVHRAGWTG
RAGNKGYAYTFITEDKARYAGDIIKALELSGTTVPPDLEKLWHDFKDQQKAEGKIIKKSS
GFSGKGFKFDETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIEXMFNSKKRVEDMA
APGTSSIPAPTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTXLAPT
VSANTIAEQLTEKINVKFNYVPLEKQEDRQDGGQNESFKRYEEELEINDFPQTARWKVTS
KEALQRISEYSEAAFTIRGTXFPPGKEPKEGEWRIYLAIESANELAVQKAKAEITRLIKE
ELIRLQNSYQPTNKGRYKVL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggagtgttcttcagaggaggaagaagttgatcttcagacagctcttacagggtatcaa
acaaaacagcgaaagcttctagaaccagttgatcatggaaaaattgaatatgagcgattt
aggaaaaacttctatgtcgaagttccagaactagcaaaaatgtctcaagaagaggtaaat
gtgtttcgattggaaatggagggcattacagttaaaggaaaaggttgtcccaaaccaatt
aaatcctgggtccagtgtggaatttccatgaagatcttaaattccctcaaaaagcatggc
tatgaaaagcccacgcccatccaaacccaagctattcctggtataatgtctggacgagat
ttgattggcattgccaaaacaggaagtggaaagaccattgcttttctgttgcccatgttt
agacacatcatgggtcagaggtcattagaagaaggagaggggccagtagctgtcatcatg
actccaactggagaactggctttacagattactaaagagtgtaagaagttttccaagact
ttgggacttagagtggtctgtgtttatggaggaacaggaatcagtgaacagattgctgag
ctgaaaagaggtgctgaaattattgtttgcacacctggtcgagtgattgacatgttagca
gctaacagtggtcgggtcacaaatcttcgaagactgacatatgttgttttagatgaagca
gacagaatgtttgacatgggttttgaaccccaggtcatgcgattcgtggataatgttcgt
cctgatcgacagacggttatgttttcagctactttccccggagctatggaggctttggct
agcaggatcctgagtaaacctattgaagtacaagttggaggcacgagtgtggtttgctcg
gatgtggagcaacaagtgattattgtgattgaagaagaaaagaaattcttgaagttactt
gagcttctaggccattatcaagagtcaggatctgtcattatatttgtggataagcaggaa
catgctgatggtcttcttaaggatttaatgagagcatcttatccttgcatgtctcttcat
ggaggcattgatcaatatgacagagatagcatcataaatgactttaagaatgggacctgc
aaacttgtggctacctctgttgttgcccgaggtctagatgtgaaacatttgattcttgta
gtaaattatagctgccccaaccattatgaggattatgtacacagagcagggtggactgga
agagcaggcaacaagggttatgcttatacttttatcacagaagataaagctcgctatgct
ggtgacataattaaagctcttgaattgtcagggaccacagtaccccctgatttagagaaa
ctgtggcatgatttcaaagatcaacagaaagctgaggggaaaataattaaaaagagtagt
gggttctctggtaagggattcaagtttgatgaaacagaacaagctttggctaatgagagg
aagaagttacaaaaagcagctcttggtctgcaagattcagatgatgaggatgctgcagtt
gacattgatgagcaaattgaangcatgtttaattcaaagaagagagtagaggatatggct
gctcctggaacatcaagtattcctgctccaactgcaggaaatgctgagaaattagaaatt
gctaagagattggctctcagaatcaacgcccagaagaatttgggcatcgagtctcaggta
gatgtgatgcaacaggccaccaatgcaattcttagaggtggcacanttctggctcccact
gtttctgcaaacaccattgcagaacaacttaccgaaaagatcaatgtcaagttcaattat
gtgcctttagagaaacaagaagacagacaggatggtggacagaacgaatcttttaagaga
tacgaagaagaattagagatcaatgacttcccacagactgctaggtggaaagttacctct
aaggaagctctgcagaggatcagtgaatactctgaagctgcatttacaatcagaggaaca
taattccctcctggtaaagaacccaaggaaggcgagtggaggatttacttggcaattgaa
agtgccaatgaactggctgtgcagaaagcaaaggcagaaatcaccaggctcataaaagaa
gagctgatccggctgcaaaattcataccaaccaacaaacaaaggaagatacaaagtctta
tag
DBGET
integrated database retrieval system
