Carassius auratus (goldfish): 113045051
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Entry
113045051 CDS
T07313
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113045051
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113045051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
DUF4407
PI3K_P85_iSH2
U-box
Exonuc_VII_L
V_ATPase_I
Syntaxin-6_N
DUF445
HR1
Motif
Other DBs
NCBI-GeneID:
113045051
NCBI-ProteinID:
XP_026060961
UniProt:
A0A6P6JMB1
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Position
27:complement(2178759..2182095)
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AA seq
570 aa
AA seq
DB search
MARTMAGTNISVAQLSCSICLKLLTDPVTLTCGHSYCTSCITGYWDQDDQKGVYSCPQCR
QIFTPRPVLGKNTMLAEVVENLRKRKLEAAQLDHYYAEPGDVECDVCTGEKNKAIKSCLV
CLNSYCQSHFECHEELHPGKRHKVTDVAGQLQEMICTQHEKLKEIFCRTDQCCICYLCML
DEHKKHDTVSAGAERTKKQTQLDEIQRKFQKRIQERETELEELRESIESYKRSAQTAVED
TERIFTELIRSIERRRSEVTQLIRDQEKSAVSQAEEQLKRLEQEIEDLRRRDAELEHFSH
TENHIHFLQSFQSLSVSPGSTDSPSITVSSCFSFNDVGKSVSHLREKLEHFCREEIEKIH
GKAKYIDINPNPEFKTRDEFLQYFFQFTVDSNTVHKNLHLSKGNRVITYTFRDQLYPDHS
DRFDTKEQALCEESVCGRSYWEVEWSGRVEMSVSYKSISRKDNEKDKNEEDDNNYDTCEF
GRNDQSWSLFCSDSSCSFWHNNKGTKLPEVSSSSRIGVYVDHGAGTLSFYSVSDTMNLIH
RVHTTFIQPLYPGFMNYYDSVVKLCEISKY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtacaatggcaggaactaatatttcagtggctcagttaagttgttcaatctgt
ctaaagctactgacagatccagtgaccctcacctgtggacacagttactgtacaagctgt
attacaggttactgggatcaggatgatcagaagggagtctacagctgccctcagtgcaga
cagatcttcactccaagacctgtcttaggtaaaaacaccatgctggctgaagtggtggag
aatctgaggaagagaaaactagaagcagctcaacttgatcactattacgctgaacctgga
gatgtggagtgtgatgtctgtactggggagaaaaataaagccatcaagtcctgtctggtg
tgtctgaactcttactgtcaaagccattttgaatgtcatgaagaacttcacccaggaaaa
cgacataaagtcactgatgtcgctggacaactacaggagatgatctgcactcagcatgaa
aagttgaaggaaatcttctgtcgtactgatcagtgctgtatatgttatctttgtatgttg
gatgagcataaaaaacacgacactgtatcagctggagcagagaggactaagaaacagaca
caattggatgagatacaaagaaaattccagaagagaatccaggagagagagacggagctt
gaggagctgagagagtctatagagtcttacaagcgctctgcacaaacagcagtggaggac
actgagaggatctttactgagctgatccgctccattgagagaagacgctctgaggtgaca
cagctgatcagagatcaggaaaagtctgcagtgagtcaagctgaagaacaactgaagcga
ctggaacaagagattgaagacctgaggaggagagacgctgagctggagcatttttcacac
acagagaaccacatccatttcctccagagtttccagtctctctctgtttctccaggatca
acagactcacccagcatcactgtcagctcttgcttttcttttaatgatgttggtaaatct
gtgtctcatctaagagaaaaacttgaacatttctgcagagaggagatagaaaagattcat
ggtaaagcaaaatatattgatatcaatcccaaccctgaattcaagacaagggatgagttt
ctacagtatttcttccagttcacagtggattcaaacacagttcataaaaacctccatctg
tctaaagggaacagagtaattacttacactttcagagaccagctgtatcctgatcactct
gacagatttgatactaaggagcaggcattgtgtgaagagagtgtgtgtggacgctcttac
tgggaagtggagtggagtggtcgggtggaaatgtcagtgtcatataagagcatcagcagg
aaggacaatgaaaaggacaaaaatgaagaagatgataataattatgacacatgtgaattt
ggacgtaatgatcagtcctggagtttgttctgctctgactccagctgctcattctggcac
aataacaaagggactaaactccctgaggtctccagctcttctagaataggagtgtatgtg
gatcacggtgcaggaactctgtccttctacagcgtctctgacacaatgaacctcattcac
agagtccacaccacattcattcagcctctctatcctgggtttatgaattattatgactca
gttgtgaaactgtgtgagatatcaaaatattaa
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