Carassius auratus (goldfish): 113045080 Help Entry 113045080         CDS       T07313                                  Name (RefSeq) DNA ligase 1-like isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism caua  Carassius auratus (goldfish) Pathway caua03030   DNA replication caua03410   Base excision repair caua03420   Nucleotide excision repair caua03430   Mismatch repair Brite KEGG Orthology (KO) [BR:caua00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     113045080    03410 Base excision repair     113045080    03420 Nucleotide excision repair     113045080    03430 Mismatch repair     113045080  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:caua03032]     113045080    03400 DNA repair and recombination proteins [BR:caua03400]     113045080 Enzymes [BR:caua01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      113045080     6.5.1.6  DNA ligase (ATP or NAD+)      113045080     6.5.1.7  DNA ligase (ATP, ADP or GTP)      113045080 DNA replication proteins [BR:caua03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     113045080  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      113045080 DNA repair and recombination proteins [BR:caua03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      113045080    NER (nucleotide excision repair)     Other NER factors      113045080    MMR (mismatch excision repair)     Other MMR factors      113045080 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  113045080 NCBI-ProteinID:  XP_026061003 Ensembl:  ENSCARG00000004212 UniProt:  A0A6P6JMP6 LinkDB All DBs Position 27:2644532..2658724 Genome browser AA seq 984 aa AA seqDB search MQRSIASFFQPMKSKEKSDGQVKTKTEPLKSPLKIQNGVQESDSPVKKVHKRSRAIIDSD DEDQPIVKEQLPKQSEAEPAKPEQESDVTKAVSTPVSPKTPITPTTPLTSSTSVAVVTPA SSGTPGTPTSTSPSGIPKRKTARKQFPKRKLESRSDGEGAKEEEKEVNEGQESKRARVEA SPEQTDNEMLEVEEKREDGKTAVEEQKEKDETKTPVVEDNANNKMKEKEKKKVKQEKKIN GENGKKEKKEDKKEKEHSSPERAFKKEKSTEEEGGSAKKKPISSFFAPRKAAVKLEKEER NEGEKKKDGEISDAAEQKEKKSEKGVDSALQSQYDPSRAHYHPIDHACWMKGQKVPYLAV ARTFEKIEEDSGRLKNIETLSNFLRSVILLSPDDLLCCVYLCLNQLGPAYQGLELGIGET ILMKAVAQATGRQLDKIKAEAQEKGDLGLVAESSRSNQRMMFAPANLTAGGVFNKLKEIA NMSGNSAMNKKIDIIKGLFVACRFSEARYIVRSLAGKLRIGLAEQSILTALSQAVCLSPP GQEFPPAVLDAGKGMSAENRRVWLEEKSLILKQTYCEMPNYDAIIPVLMKEGIDELPNHC KLTPGVPLRPMLAHPTKGVGEVMKRFDEASFTCEYKYDGERAQIHILENGEVRIFSRNQE DNTSKYPDIISRIPQVKKENVRSCVLDSEAVAWDREKKQIQPFQVLTTRKRKDVDASEIK VQVCVYAFDLLYLNGESLVREPLSKRRALLQESFEEKEGEFVFARSLDADNTESIAEFLE QSVRDSCEGLMVKTLEKHATYEIAKRSHNWLKLKKDYLEGVGDTVDLCVIGAYLGKGKRA GSYGGFLLACYDEENEEFQSVCKIGTGFKDEDLEQHYNFLKEHILPKPRPYYRVDQSAEP DVWLEAVQVWEVKCADLSLSPVYKAAMGLVDPEKGISLRFPRYLRIRDDKKPEDATTGSQ IADLYKKQQQIQNQGEKQDLEDYY NT seq 2955 nt NT seq  +upstreamnt  +downstreamnt atgcagcgaagcatagcgtcattctttcagccaatgaaaagtaaggagaagagtgatgga caggtcaaaacaaagactgaacccttaaaaagtcccctcaaaattcagaatggtgtgcag gaaagtgattcaccagtaaagaaggtgcataaacgcagtcgtgcaatcatagacagcgat gatgaagatcagccgatagtaaaagagcagctgccaaaacagagtgaagctgaaccagca aagccagagcaggaatctgatgttacaaaggctgtttccactccggtttctccaaaaact cccataaccccaacgactccgctcacgtcgagtacctctgttgcggtggttacccctgct tcctccggtactcctggaactccgacatcaacatcgccgtccggcattcccaaacgcaag accgcccgcaagcagttccccaagaggaagctggaaagcagaagtgatggagaaggggca aaagaggaggaaaaggaggtcaatgaagggcaggagagtaagagagcacgagttgaggcc tcacctgaacagacagacaacgagatgttggaggtggaagagaagagagaagatgggaag actgcagtggaggaacagaaagagaaggatgaaacaaaaacacccgtagtggaggacaat gcaaacaataagatgaaagaaaaggagaaaaagaaggtaaagcaggagaaaaagataaat ggagagaatgggaagaaagaaaaaaaagaagacaagaaagagaaggaacacagcagtcct gaacgagcttttaaaaaagaaaaaagcacagaagaggaagggggatcggccaaaaagaaa cccatcagcagcttttttgcacccagaaaggcagctgtcaaactggaaaaagaggagcga aatgagggagaaaaaaagaaggacggagagatctctgatgctgctgaacagaaagagaag aaaagtgaaaagggggtggattctgcactccagagccagtatgatccctccagagctcat taccatcccattgaccatgcctgctggatgaagggccaaaaagtgccatatttggctgtc gctcgcacctttgagaagattgaagaggattcaggcaggctgaagaacattgaaacgctt tccaactttctgcgatctgtaattctgctttctccagatgacctgttatgctgtgtgtac ctgtgtctgaatcagctcggccctgcatatcagggtctggagctgggcattggggagacc attctgatgaaagctgtggctcaggcaactgggcgacaactggacaaaatcaaggcagag gctcaggagaaaggtgacctgggattggttgctgaaagttctcgcagtaaccagagaatg atgtttgcaccggccaatctgacagcaggaggcgttttcaacaaactgaaagagattgct aacatgagtggaaattctgcaatgaataagaagattgacattattaaaggcttgtttgtg gcgtgtcggttttctgaggcccgatacattgtgcggtcactggctgggaagctgcggatc ggattggctgagcagagcattctcacggctctcagtcaagctgtgtgtctgtcgcccccg ggccaagagttcccaccagctgtgctggatgctgggaaaggaatgagtgctgaaaacagg agagtgtggctggaggagaaatcactgatcctaaaacagacatactgtgagatgccaaat tatgatgcaatcattcctgtattgatgaaggagggcatagatgaactgcccaatcactgc aagctcaccccaggtgtgcccctgcggcccatgttggcccacccgactaaaggggttggg gaggtaatgaaacgtttcgatgaggcatctttcacctgcgagtataaatatgatggagag agagcccagatccatattcttgagaatggagaggtgcgcattttcagccgaaaccaagaa gacaacaccagcaaataccctgatattatttcacgaatcccacaggtgaagaaagagaac gtacggtcctgtgttctggattcagaggcggttgcctgggacagagaaaagaaacagatc cagccatttcaggtcctcaccacaaggaagagaaaggatgtggatgcatctgagatcaag gttcaagtgtgtgtgtacgcctttgatctgctgtacctcaacggagagtctctggtgcga gagcctctgagcaaacgcagggctctgttacaggagagttttgaggagaaagaaggagag tttgtttttgctcgatctctggacgctgacaacacagagagcattgctgagttcctggag cagtctgtacgagattcttgtgagggcctaatggtgaagacattggaaaaacatgcaact tatgagattgccaaacgctcccacaactggctcaagctgaagaaggactatcttgagggt gttggagatacagtggatctgtgtgtgattggtgcttatctggggaaggggaagagagca ggcagctatggaggatttctactggcctgctacgatgaggagaacgaggagttccagtct gtctgcaagattggaacaggcttcaaagatgaagatctggagcaacattacaatttctta aaggagcacatcttaccaaaaccacgtccatattaccgtgtggaccaatcagctgagccg gatgtctggctggaggcggtgcaagtgtgggaggtgaaatgcgctgacctttcactgtct ccggtttacaaggcagcgatgggattggtggacccagagaaaggcatttcacttcgtttc ccacggtacctcaggattagagatgacaaaaagccagaggacgccaccacagggtcacag attgcagatctttacaagaaacagcagcagattcaaaaccagggtgaaaagcaagatctg gaggactactattga

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