Carassius auratus (goldfish): 113046705 Help Entry 113046705         CDS       T07313                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K06236   collagen type I alpha Organism caua  Carassius auratus (goldfish) Pathway caua04510   Focal adhesion caua04512   ECM-receptor interaction caua04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:caua00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     113046705  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     113046705   09142 Cell motility    04820 Cytoskeleton in muscle cells     113046705  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:caua00536]     113046705 Glycosaminoglycan binding proteins [BR:caua00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    113046705 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  113046705 NCBI-ProteinID:  XP_026063409 Ensembl:  ENSCARG00000023493 UniProt:  A0A6P6JU61 LinkDB All DBs Position 28:8964216..8981253 Genome browser AA seq 1448 aa AA seqDB search MFSFVDIRLALLLSATVLLARGQGEDDRPDGSCTMDGQVYNDRDVWKPEPCQICVCDSGT VMCDEVICEDTTHCANPVIPNDECCPVCPDDEFKEPGAEGPRGPAGEKGDRGPPGPPGND GIPGQPGLPGPPGPPGPPGLGGNYSPQMSGGFDEKSGGAMVVPGPMGPMGPRGPPGPPGS SGPQGFTGPPGEPGEAGAPGPMGPRGPAGPPGKNGEDGESGKPGRPGERGPPGAQGARGF PGTPGLPGIKGHRGFSGLDGAKGDTGPAGPKGEPGAAGENGTPGAMGPRGLPGERGRAGP PGSAGARGNDGAAGAAGPPGPTGPAGPPGFPGGPGAKGEVGAQGARGAEGPQGARGEPGN PGPAGAAGPAGNNGADGAPGLKGAPGAPGIAGAPGFPGPRGPPGPSGAAGAPGPKGNTGE VGAPGSKGEAGAKGEAGAQGVQGPPGPSGEEGKRGPRGEPGSAGARGPPGERGAPGARGF PGADGSAGPKGATGERGGPGVVGPKGATGEPGRNGEPGLPGTKGMTGSPGSPGPDGKTGA TGAPGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGALGATGAPGKDGD VGAPGAPGPAGPTGERGEQGPSGPPGFQGLPGPQGATGEPGKAGEQGVPGEAGAPGPAGS RGDRGFSGERGAPGPAGPAGARGSPGASGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGS AGLPGLKGDRGDQGAKGTDGAPGKDGIRGMTGPIGPPGPAGAPGDKGESGAPGLVGPIGA RGPPGERGETGPPGPAGFAGPPGADGLPGAKGEPGDNGAKGDAGAPGPAGATGAPGPQGP VGATGPKGARGAAGPPGATGFPGATGRVGPPGPAGNAGPAGPPGAPGKEGQKGNRGETGP AGRTGEVGAAGPPGAPGEKGNPGAEGATGPAGIPGPAGIAGQRGIVGLPGQRGERGFPGL PGPSGEPGKQGSSGPSGERGPPGPMGPPGLAGPPGEPGREGTPGNEGSAGRDGAPGPKGD RGETGSAGTPGAPGPPGAPGPIGPAGKTGDRGESGPAGPAGAAGPAGPRGPAGPAGARGD KGETGEAGERGMKGHRGFTGMQGPPGPPGPSGEPGPAGASGPAGPRGPGGSAGPAGKDGM SGLPGPIGPPGPRGRNGEIGPSGPPGPPGLPGPPGPSGGGFDIGFIAQPQEKAPDPFRSY RADDANVMRDRDLEVDTTLKSLSQQIESIMSPDGTKKNPARTCRDLKMCHPDWKSGEYWI DPDQGCNQDAIKVYCNMETGETCVYPTESSIPKKNWYTSKNIKEKKHVWFGEAMTDGFQF EYGSEGSKPEDVNIQLTFLRLMSTEATQNITYHCKNSIAYMDQASGNLKKALLLQGSNEI EIRAEGNSRFTYSVTEDGCTSHTGAWGKTVIDYKTTKTSRLPIIDIAPMDVGAPNQEFGI EVGPVCFL NT seq 4347 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatattcggttggcgctgttgctcagcgcaactgtgcttttggca agaggacaaggagaagatgatcgcccagacggcagctgcacaatggacggccaggtctac aatgacagggacgtctggaaaccagagccatgccaaatctgcgtgtgcgacagcggcacc gttatgtgcgacgaggtgatctgcgaggacacgacccactgcgccaacccagtgattccc aacgacgagtgctgccccgtctgcccagacgacgaattcaaggagcccggtgctgaggga ccaagaggtcctgctggtgagaagggtgacaggggtcctcctggccctcccggcaatgac ggaatccctggacagcctggtcttcctgggcccccaggcccccctggacctcctggcctt ggaggaaactattctcctcagatgtctggtggatttgatgagaaatccggaggagcaatg gtcgtcccaggccccatgggacctatgggcccccgtggaccccctggacctcctggatct tctggaccccaaggatttactggtccccctggtgagcctggtgaggctggtgctcctggt ccaatgggtccccgtggtccagctggtccccctggaaagaacggagaggatggtgagtct ggcaaacccggtcgccctggtgagcgcggaccccctggcgcacagggtgctcgtggattc cccggaacccctggacttccaggcatcaaaggacacagaggattcagcggtctagatgga gctaagggagacactggccctgctggacctaagggtgagcctggtgccgctggtgagaac ggaactcctggagctatgggtcctcgtggtctgcctggtgagagaggccgcgctggtcct cctggttctgctggtgctcgtggtaacgatggtgctgctggagctgctggtcctcctggc ccaactggccctgctggtcccccaggattccctggtggccctggagctaagggagaggtt ggtgctcagggagctcgtggtgcagagggaccccagggagcccgtggagagcctggtaat cctggacctgctggtgctgctggacccgctggtaacaatggagctgatggtgcccctggt cttaagggtgctcctggcgctcctggtattgctggtgctccaggtttccctggacctcgt ggtcctcctggaccttctggagctgctggtgctcctggccctaagggtaacactggtgag gttggtgcccctggttccaaaggagaggctggtgctaaaggagaggctggtgcccaagga gttcagggtccccctggcccctctggtgaagaaggcaagagaggacctcgtggtgagccc ggttctgctggtgcccgcggaccccctggtgaacgtggtgctcctggtgctcgtggtttc cctggtgctgatggatctgcaggtcctaagggtgccactggtgagcgtggaggccctgga gttgttggacctaagggtgccactggtgagcctggccgcaatggtgaacctggtttgcca ggaaccaagggtatgactggtagccctggcagccctggacctgatggaaagaccggagct actggtgctcctggacaagatggccgccctggaccacctggccccgttggagccagagga caacctggtgtcatgggattccctggacctaagggtgctgctggtgaggctggcaaaccc ggtgagagaggtgtgatgggtgctcttggtgccactggtgctcccggtaaggatggtgat gttggcgcccctggtgctcctggacctgctgggcctactggtgagagaggtgaacaggga ccttctggtcctcctggattccagggtctgccaggacctcagggtgcaactggtgagcct ggcaaagctggtgagcagggtgttcctggagaggctggagctcctgggccagctggatcc agaggcgacagaggattctctggtgagcgtggtgcccctggccctgctggtcctgctggt gcccgtggatctcctggtgcatctggtaacgatggcgctaagggtgatgctggtgctcca ggtgcccctggtgctcagggtcctcccggacttcaaggaatgcctggcgagcgtggttct gctggtctgccaggtcttaagggtgacagaggtgaccaaggtgccaagggtactgatggt gcccctggtaaagatggcatccgtggtatgaccggcccaattggacctcctggacctgct ggagctcctggtgacaagggagagtctggtgctcctggacttgttggacctattggtgcc cgtggaccacctggtgagcgtggagagactggtcctcctggacctgccggatttgctgga cctcctggtgccgatggtctgcctggtgctaagggagagcctggagacaatggtgctaag ggtgatgctggtgctccaggacctgctggagcgaccggtgcccccggacctcagggtcct gttggtgctactggacccaagggtgcccgtggtgctgctggtcctcctggtgctactggt ttccctggtgctactggcagagttggacctcccggccctgctggaaacgctggacccgca ggacctcctggagcacctggtaaggaaggccagaaaggtaaccgtggtgagactggacct gctgggcgcactggtgaagttggtgctgctggaccacctggtgcccctggtgagaaagga aatcctggagctgagggtgctactggccctgcaggtatccctggacccgcaggtattgct ggtcagcgtggtattgttggtctccctggccaaagaggcgagcgtggtttccctggtctc cccggtccatctggagagcctggcaaacaaggatcatctggtccttctggtgagcgtgga cctcctggacccatgggaccccctggattggctggacctcctggtgagcctggtcgtgag ggtactccaggtaatgagggctctgctggacgtgatggtgctcctggccccaagggtgac cgtggtgagactggctctgctggcacccccggtgctcctggacctcctggcgctcctgga cccattggccctgctggaaagactggtgatcgtggagagtctggccctgctggtcctgcc ggtgctgctggccctgctggtccccgtggacccgctggacccgctggagctcgtggagac aagggtgagactggtgaggctggtgagagaggcatgaagggacacagaggatttaccgga atgcagggaccaccaggacctcctggaccctctggagagcctggacctgctggagcttct ggacccgctggaccaagaggccctggtggatctgctggacccgctggtaaggatggtatg agcggccttcctggacccattggaccccctggaccccgtggtcgcaatggagaaattgga ccatctggaccacctggaccccccggactccctggacctcctggaccctctggtggtgga tttgatattggcttcattgctcagccacaggagaaggcccctgatcccttccgctcatac cgtgccgatgatgccaatgtgatgcgcgaccgtgaccttgaagttgacaccaccctcaag tccctgagccaacagattgagagcatcatgagcccagatggcaccaagaagaatcctgca cgcacttgccgtgacctgaagatgtgccacccagactggaagagcggtgagtactggatt gaccctgaccagggctgcaaccaggatgccatcaaggtctactgcaacatggaaactggt gagacctgcgtctacccaactgagtcctccattcccaagaagaactggtacacaagcaag aacatcaaggagaagaagcatgtctggttcggagaggccatgaccgatggcttccagttt gaatatggcagcgagggctctaagcctgaggatgtcaacattcagctcaccttcctgcgc ctcatgtccactgaggccacccagaatatcacataccactgcaagaacagcattgcatac atggaccaggcttctggcaacctgaagaaggctcttctgctccagggctccaatgagatc gagatcagagcagagggcaacagccgcttcacatacagtgtcactgaggatggttgcacg tcgcacaccggtgcatggggcaagacagtcatcgactacaaaacaacaaaaacatcccgt ctgcctattattgacatcgcccctatggacgttggtgcacctaatcaggaatttggcatt gaagttggcccagtctgcttcttgtaa

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