Carassius auratus (goldfish): 113047772
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Entry
113047772 CDS
T07313
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113047772
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
caua04030
]
113047772
G protein-coupled receptors [BR:
caua04030
]
Frizzled / Smoothened family
113047772
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
113047772
NCBI-ProteinID:
XP_026064840
Ensembl:
ENSCARG00000006387
UniProt:
A0A6P6JZ23
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Position
29:complement(511353..517124)
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AA seq
821 aa
AA seq
DB search
MSSKRLCSIVGGFWMLCIWATTSIITQAVILHPNETVFSDFCKKPTTCEVLKYNTCLGSP
LPYTHTSLILAEDSETQEEALEKLAMWSGLRNAPRCWAVIQPLLCAVYMPKCENGKVELP
SQHLCQATRKPCSIVERERGWPNFLKCENKEQFPKGCQNEVQKIKFNTSGQCEAPLVKTD
IQASWYKDVEGCGIQCNNPLFTDEEHSNMHNYIAIFGSITLLCTFFTLATFLADWKNSNR
YPAVILFYINACFFIGSIGWLAQFMDGARKEIVCKSDDTMRLGEPSSTETLSCVIIFVMV
YYSLMSGVIWFVMLTYAWHSSFKALGTTHQPLSGKTSYFHLVTWSIPFILTVAILAIAEV
DGDSVSGICFVGYKNYRYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKA
ASKINETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWEKSFREYVLCEANVTIAHQTN
KPIPECAIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWFRIIGRSDDEPK
RIKKSKMIAKAFSKRKELQKDPEKELSFSMHTVSHEGPVAGINFDLNEPSMEMSSAWAQH
VTKMVARRGAILPQDISVTPTGTPVPPPEERNKLWMVEAEISPEMMKRKKKKKRRKELQP
TGPAADEGKTAYSRREFGPSSVPRLPKLPGRQSLVANQWEQQRQRQEEQDMLPGAFPEFR
PSCPLPYQERYGGLGYLHNKPSSLPLANPLTLRDSMQDDSDGFQQSSWHPNWVFRHLGQE
ASVMDAGRTAVVPRADGRRGIPIHSRTNLMEAELLDADSDF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaagcgactctgctccattgttggaggcttttggatgctttgtatctgggca
acaacctctataatcactcaggcggttatcttgcacccaaatgaaacggtattcagcgac
ttttgtaaaaaaccgacaacttgtgaagtactaaaatacaatacgtgccttggttcacct
ttgccgtacacgcacacgtctctcattctggctgaagactcagaaactcaagaggaagcc
ttggagaaattggccatgtggtctgggttgagaaatgctccccgctgttgggccgtcatt
cagccgttgttgtgtgctgtttacatgccaaaatgcgagaatgggaaggtcgaactgccc
agccagcacctgtgccaagctacacgcaaaccttgcagtattgtggagcgggaaaggggc
tggcccaacttcctcaagtgtgaaaacaaggagcagttccctaagggttgccagaatgag
gtccagaagatcaaattcaacacttcaggacagtgtgaggctcccttggtcaaaaccgac
atccaggcaagttggtacaaggacgtggaaggttgtgggatccagtgcaacaatcccctg
ttcacggatgaggagcactcaaacatgcataactacattgccatcttcggctccatcact
ctcttatgtaccttctttacgctggccacgtttcttgccgactggaagaattccaaccgt
taccccgctgtgatcctcttttacatcaacgcatgtttctttatcgggagtattggatgg
ctcgctcagttcatggatggagcccgcaaggagattgtgtgcaaaagcgacgacactatg
cggcttggagaaccatcatccaccgagacgctgtcatgcgtgattatcttcgtcatggta
tattattctctaatgtctggggtcatttggtttgttatgctcacttatgcctggcactcg
tcgtttaaagccctgggcaccacccatcagcctctgtctggaaaaacatcctattttcat
ctggtcacatggtctatccctttcatactgacagttgctatactggccattgcagaggtg
gatggagattcggttagcggcatttgctttgttggctataagaactacagataccgtgca
gggtttgttctggctcctatcggggtggtccttgtcgttggcggttatttcctgatacga
ggagttatgacattgttttccattaaaagtaaccatccggggctgctcagtgaaaaagct
gctagtaaaatcaatgaaaccatgctgaggcttggtatatttggattcttagcctttggt
tttgttttcatcactttcggctgccatttctatgactttttcaaccaagctgagtgggaa
aaaagcttcagggaatatgtcctatgtgaggctaatgtcaccatagctcaccagaccaac
aagccgatcccagagtgtgccatcaagaacaggcctagtcttctggtggagaagatcaac
ctcttctccatgttcggtacaggcattgcaatgagcacatgggtctggacaaaagccacc
atccttatctggaaacgcacctggttcagaatcattggaagaagtgacgatgagccgaaa
cgaattaagaagagtaaaatgattgccaaggcattctcaaagcgaaaagaactgcagaag
gatccagagaaagagctgtccttcagcatgcacactgtttctcatgaaggacctgtagcg
ggtatcaactttgacctgaatgagccatcaatggaaatgtcttctgcgtgggcccaacat
gtgaccaagatggtagctagaagaggggcaattttaccacaggatatctcagtgacgccc
accggaacacctgttccacctccagaggaaaggaacaaactttggatggttgaagcagaa
atttctcctgaaatgatgaaaagaaagaagaagaaaaagagaaggaaggaattacagcca
acgggtcctgcagcggacgaagggaagactgcctacagccggagggagtttggccccagc
tcagtcccccgtctcccaaaacttccaggccgccagagtctggtggctaaccagtgggag
cagcagcgacagcggcaggaggaacaggatatgctacctggagccttccctgaattcagg
ccttcgtgtcctcttccttaccaggagagatatggtggtttgggatatttacacaataaa
ccctccagcctccctcttgctaatcccctgacgctaagagatagcatgcaagatgattca
gatggcttccagcaatcatcatggcaccctaattgggttttccggcaccttgggcaggag
gcttccgtgatggatgctggcaggactgcggttgtgccacgggccgatggcaggaggggt
ataccaatacactccagaacaaatcttatggaggccgagctattggatgctgactcagat
ttttaa
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