Carassius auratus (goldfish): 113090813
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Entry
113090813 CDS
T07313
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
caua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113090813
09124 Replication and repair
03420 Nucleotide excision repair
113090813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113090813
03400 DNA repair and recombination proteins [BR:
caua03400
]
113090813
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113090813
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113090813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
113090813
NCBI-ProteinID:
XP_026112205
Ensembl:
ENSCARG00000051135
UniProt:
A0A6P6NTP6
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELSPEILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDHPLP
QAAVALWVKKDSQKDHDQCVSVLTGLRLWHSQHLQGGLQGFVLNPVFKDNLRTALLGGGK
PWADEGSNLGPDRHVRDVESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLIQAGLMKS
ETGEAPCITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTVNPASGSASTALG
ATAGTGDTGFIVVETNYRLYAYTNSELQIALVALFSEMLYRFPNLVVAQVTRESVQQAIA
NGITAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELEKDRLQFTEGVLYNQFLSQV
DFEVLRDRAQGLGVLVWQNPAHRVMVVTPHGHSEVKRFWKRQKSHT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgagtccagctgcagtgcaagaacttgcacgagtatctgaaggaactgagt
ccagagatcctcgacagactctacaatcacccagcgacatgtctggcagtctacagggaa
cttccatcactggcaaagaattatgtgatgcggatgctgtttttagaccatcctcttcca
caagctgcagtcgcgctgtgggtcaaaaaagacagtcaaaaagaccacgatcagtgtgtg
tctgtgttaaccgggctacggctctggcacagtcagcaccttcaaggtggacttcaaggc
tttgtgctgaaccctgtgtttaaagacaacctgagaacagcacttctaggcgggggtaaa
ccgtgggcagatgagggtagtaacctgggtcctgatcgtcatgtgagggatgtagagagt
ctggaccgctatgccatggagcgctgggaggtcatccttcacttcatggtgggctctccc
agcgcagccgtcagccaggatctggcccagctcctcatacaggccgggctcatgaagagc
gagactggtgaggctccttgtatcacatcggcagggtttcagttcctgctgctggacaca
gcatctcagctgtggtacttcaccctgcagtacctcaagacagcacagtcgagaggaatg
gacctggtggagattctttcctttttgttccagctgagtttttccactcttggtagggat
tattctgtggagggcatgagtgagtctctgctcacatttttgcaacatttacgagagttc
ggtctggttttccaaagaaagaggaagtcaaggaggtactaccccaccaggttggccata
actctagctgcaggggtcacagtaaaccctgcctctggatctgcttcgactgcactcgga
gccacggcgggaacaggagacacaggcttcatcgttgtagaaacgaattaccgtctgtat
gcctacacaaactctgagctccagattgcactagtagctctatttagcgagatgctgtat
cggtttcctaacctggtggttgcacaggtaaccagagagtcagtgcagcaggccatcgct
aacggcattactgcacagcagatcattcacttcttaaggacccgagctcacccagtaatg
cttaaacagacccctgttcttcccccaaccatcacagatcagatcagactgtgggagctc
gagaaagatcgcttacagttcactgagggagtgttgtacaaccagtttctatcccaggtt
gattttgaagtgttgcgggacagggctcagggtttaggtgtgctggtttggcagaacccc
gctcacagggtcatggtggtgacgccacatggacacagcgaggttaagcgattctggaag
agacaaaagagccatacatag
DBGET
integrated database retrieval system
