Carassius auratus (goldfish): 113095147
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Entry
113095147 CDS
T07313
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
113095147
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113095147
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113095147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
NPR3
CDC45
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
113095147
NCBI-ProteinID:
XP_026116551
Ensembl:
ENSCARG00000063202
UniProt:
A0A6P6P5Y0
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MTVVPASGGVAVPPQMSPIMEVDTEEDNEDPIPTPSAGRVFNINNSNNNEEEDKKKKKKE
KKEKKEKKEKKEKKEKKEKTEKNPKDEKEKENEKEKEKEKEKEKEKEKEKEKEKEKEKDK
DKKEGPKEVFVINPAGLLYYQWLLIITIPVMYNWTAIIARACFEELQHNYLLIWFFLDYT
SDLLYLADMAFRSRTGYLEQGLLVKDEKLLLQRYKDSLQFRIDVISMLPTDIFYFVLGLD
YPEIRINKLLRLNRMFEFFTISETMTNYPNIFRICTLIMYIIIIIHWNACLYFSFSKAIG
FGSDAWVYPSLTEDEFGELGRKYSFSLYWSTLTLTTIGETPSPELDSEFLFHVVDFLVGV
LIFATIVGNIATMISNMNAAQAQFQARIDNIKQYMHARHVSKDLEIRVIKWFDFLWTNKK
AQDEREVLRYLPDKLRAEIGMNVHLDTLKKVRIFADCEAGLLIELVLKLRPQVFSPGDYI
CRKGDIGREMYIIKDGKLAVVADDGVTQFVVLGDGSYFGEISILNIKGSKAGNRRTANIR
SIGYSDLFCLSKDDLMEALTEYPEAKAMLEDKGRQILLKDGLLELDPAKLKPDERDLEDR
VNRVYSTMQLMQTKVKKLLAEHEETRKEIKRRIAQIERFAGEVVEDEDEEEEMEKKEETE
EQKKEEEPEKEKLEEDKEKTEEKEEEKTEEATKEEKKDEEP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgtacctgcatcaggaggtgttgcagtcccaccccaaatgtctccaataatg
gaagtggacacagaggaggacaatgaagacccaattccaactccaagtgcaggacgtgta
tttaacataaacaacagcaacaacaatgaagaggaagacaaaaagaaaaagaaaaaggag
aaaaaagaaaagaaggagaagaaagagaaaaaagaaaagaaagagaagaaagaaaaaact
gagaagaatccaaaggatgaaaaagaaaaagaaaatgaaaaagaaaaggaaaaagaaaag
gaaaaggaaaaggaaaaagagaaggaaaaggaaaaggaaaaggagaaagaaaaagataaa
gataaaaaggaagggcctaaggaggtgttcgtgattaacccagcgggactcctgtactac
caatggctgcttataatcacaattcccgtcatgtacaattggacagccataattgcaaga
gcctgctttgaggagctacagcacaattatctcctgatatggttcttcctggactacacc
tccgacctgctttatttggctgacatggccttcagatcacgaacaggttacctggaacag
ggcttactagtcaaagacgaaaagctccttcttcagcggtataaagacagtctccagttc
cggattgatgtcatctctatgcttcccacggacatcttctacttcgttttagggttagac
tacccagagatccgcataaacaagctgctccgcctcaaccgcatgtttgagttcttcaca
atctcagaaaccatgaccaactaccccaacatcttccgaatctgcactttgatcatgtat
atcatcatcatcatccactggaacgcatgcctctacttctccttctccaaggccatcggg
ttcggatcagatgcatgggtgtatccatctctcaccgaagatgagttcggagagcttggg
cgaaaatattccttcagcctctactggtccactcttaccctcaccaccatcggggagacg
ccgtctccagagctagactctgaattcctctttcatgtggttgacttcctggtgggtgtc
ttgatcttcgccaccattgtgggtaacattgctacaatgatctcaaatatgaacgcggcc
caggctcagtttcaagccaggattgataacatcaagcagtacatgcacgcgcggcatgtc
agcaaggatcttgagatccgtgtcatcaagtggtttgacttcctgtggactaacaagaaa
gcacaagatgaacgagaggttctgaggtacctgccagacaagttacgggcagagataggc
atgaacgtgcacttagataccctcaagaaggtgcggatctttgccgactgtgaagcaggg
ctgctaatcgagttggtgttgaagcttcgcccacaagtcttcagtcccggtgactacatc
tgtcgcaagggcgatattggtcgggagatgtacatcataaaggatggcaaactcgctgtt
gtggctgacgatggtgtcactcaatttgttgtcctcggcgatggaagctactttggagaa
atcagcattctaaacatcaagggcagcaaggctgggaaccgtagaacggccaatatccga
agcataggatactccgacctcttctgcctgtccaaagatgatctgatggaggctttgact
gaatatccagaggctaaggccatgctggaggacaaagggagacagattctgctgaaggat
ggtttgttggagctggaccctgcgaaactgaagccagacgagagggacttggaggaccgt
gtgaaccgagtgtacagcacgatgcaactcatgcagaccaaagtgaagaagctgctggcc
gaacacgaggaaacgcgaaaggaaatcaaacggcggattgctcagatagagcgcttcgct
ggagaggtggtggaggatgaagatgaagaggaggagatggaaaagaaggaagaaacggag
gagcaaaagaaagaggaagagccagagaaagagaagttagaagaagacaaggaaaagacg
gaagaaaaagaggaggaaaaaacggaggaagcaaccaaagaggaaaagaaagatgaggag
ccatag
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