Carassius auratus (goldfish): 113106482
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Entry
113106482 CDS
T07313
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caua01002
]
113106482
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113106482
Enzymes [BR:
caua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113106482
Peptidases and inhibitors [BR:
caua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113106482
Ubiquitin system [BR:
caua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113106482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
113106482
NCBI-ProteinID:
XP_026124247
Ensembl:
ENSCARG00000063051
UniProt:
A0A6P6PTY7
LinkDB
All DBs
Position
7:complement(31184728..31219536)
Genome browser
AA seq
1372 aa
AA seq
DB search
MMVPSEEQQLVPKEGIFWSCRQSIFEEMQKRFSQIESAAEEPRVLCIVQDTTNAKTVNER
LTLNLPASTTVNKLFEDVAHKAGYVNGTFCLGWANTGNMAPLDQASEMSLVLSGFEAGKR
NFLQLTDKDGEQPQIASDESGTADSSGLDDSSRDRFIGPLPRDGTVGCSSDYSSPSYSYS
SILNKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEDSEEDPVNSIPYQLQ
RLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLI
NQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETLD
GPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDM
SPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLDNTSSAERALK
PKSSLTFELFSVMVHSGSAAGGHYYACIKSFSDSQWYSFNDQHVSKITQDDIRKTYGGSS
GSRGYYSSAFASSTNAYMLMYRLKDPSRNAKFLEVEGFPEHIKRLVQREKESEEQEKRQR
EIERNTCKIKLFCMHPVKMMMMENKLEVHKDKTLREATEMAYKLMDLDGVVPLDCCRLVK
YDEFHEYLERSYEGEEDMPMGLLLGGVKSSYMFDLLLEIRRPDQVFQPYKPGEVMVKVHV
VDLKSESIAAPVSVRAYLNQTIIEFKQLIAQATGLCAETMRIVLERCYNDLRLLYVPNKT
LKAEGFFRSNKVFVESSDSTDHQAVFTDSYLWKLLDRHGNTIRLFVSLPEQSPGSLANRT
SCPKASADSEDSFDGAKGSRKSVEAILEESTEKLKNLSLQQQQQQQSSSTSDSQKSSEHS
DFEFIESPSQEPDAASQPSQTENCTRTASDTENQFPSEERSDSDVNNDRSTSSVDSDILS
SSHSSDTLCNADSGPLPLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDENG
KSKAEAQYLYFKTEPYSQDDGSGEGQKCLLVHVDKRITLAAFKQNLEPFVGVPSTQFKVF
RVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNDPEPCKFLLD
TVFAKGMTVRQSKEELLPQLKDQCKLDLSVDRFRLRKKTWKNPGTVFLDYHVYEEDINIS
SNWEVFLEVLEEPERMKSMSQLAVLSRRWCPAQMKLEAFHEVVLESSSVEELKEKLSELS
GIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDSTEE
LMELSEDQRNELMKKESSRLLKTGHRISYSPRKEKALKIYLDGGPTKDPGQD
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcccagcgaagaacagcagcttgtgcccaaagagggtattttttggagttgc
aggcagagtatttttgaggagatgcagaagaggttctcacagattgaaagtgcagcggag
gagcctagagtgctgtgtatagtgcaggacaccaccaatgccaagaccgtcaatgagagg
ctgacgctcaacctgcccgcctccaccaccgtcaacaaactcttcgaggatgtggctcac
aaggctggatatgtgaacggcactttctgcttggggtgggccaacactggcaacatggct
cctctggaccaggccagtgagatgtccctggtgttgtccggttttgaggcggggaaaaga
aattttctgcagcttacggacaaggatggggaacagcctcagatcgcttcagatgaatct
ggcactgcagacagcagtggtcttgatgacagctctcgggatcgcttcatcggaccctta
ccgcgggacgggactgtcggctgcagtagtgactacagcagccccagttactcgtactcc
tccatacttaacaaatcagacacaggttatgtaggtttggtcaaccaagcaatgacttgt
tacctgaacagcctcctgcagaccctgttcatgacccctgagttcaggaatgcactctac
aattgggagtttgaggactctgaggaggatccggtcaacagtatcccataccagctccag
aggctgtttgtgcttctgcagaccagtaagaagcgcgccatcgagactacagacgtgacc
cgcagctttggctgggacagcagtgaggcctggcagcagcatgacgtccaggagctttgt
agagtcatgtttgatgcactggagcagaagtggaaacagacagagcaggctgacctgatc
aaccagctttaccagggcaaactgaaggactatgtgcgctgtttggagtgtggctatgag
agctggaggattgacacgtacttggacatccctctggtcatcaggcccttcggggccagc
caggcttttggcagcgtggaagaagccctgcaagctttcatccagcctgagactctcgat
ggtcccaaccaatacttctgtgagcgctgcaaaaagaaatgtgacgcccgcaagggtctg
agattcctccatttcccatacctgctgactctgcagctgaaacgcttcgactttgattac
accactatgcaccgcattaaactcaatgaccgcatgaccttcccagaggagctggacatg
agccccttcatcgacgttgaggatgagaaatcacctcagacagagagctgcactgacagt
ggggcggagaatgaaggaagctgccacagtgaccagatgagcaatgatttctctacggat
gatgctgttgacgagggcatctgtctggataacaccagcagcgcagagcgggcgctcaaa
ccaaagagctcattgacctttgaactcttctcggtcatggtgcattctgggagtgctgca
ggtgggcactactacgcctgcattaagtccttcagtgacagccagtggtacagcttcaat
gaccagcacgtcagcaagatcacgcaggatgacattcggaagacatatggtggatcctca
gggagcagaggctattactccagtgcctttgccagctctacaaatgcatacatgctcatg
tacagactaaaagacccctcccggaatgcaaaattcctggaagtggagggcttcccagag
cacataaagagactagtgcagcgagagaaagagtctgaagaacaggagaagaggcaaaga
gagatcgagcgcaacacatgcaagatcaagctcttctgcatgcatccagtgaagatgatg
atgatggagaataagctggaggttcacaaggacaaaactctcagagaagcaacagaaatg
gcatacaagctgatggatcttgatggagtggtgccactggactgctgccgattggtgaaa
tacgatgagtttcacgaatatctagaacgttcatatgaaggagaggaagacatgcctatg
ggtctgctgctcggcggggtcaagtcttcgtacatgtttgacctgctcctcgagatccgc
aggcctgaccaagtgttccagccctacaaacctggagaggtgatggtgaaggtccacgtg
gtggatctgaagagtgagtctattgctgctccagtcagtgtcagggcatatctcaaccag
actattatagagttcaagcaactcattgcacaggccactgggctttgtgcggagacgatg
cgtatcgtcttagagcgctgctacaatgacctacggctgctttatgtgcccaacaagact
ctgaaagcagaaggtttcttcaggagtaacaaggttttcgtggagagctcagactcaacg
gaccatcaggccgttttcactgactcttatttgtggaagctcctggatcggcacgggaac
acaatcagactgtttgtctccttgcccgagcagtcgccaggctctttggccaacagaact
agttgccccaaagctagcgctgactctgaggactcttttgatggggcgaagggcagcagg
aagtcagtggaagccattcttgaagagagcacagagaagctaaagaatctttctttacaa
caacagcagcagcagcaatcctccagcaccagtgacagtcagaaaagctcagaacacagc
gactttgagtttatcgagtcgccatcacaggagccggatgctgcctcgcagccttcccag
acagagaactgcacacggaccgcctcagacactgagaaccagttcccctctgaggagcgc
tccgactctgacgtcaataacgaccgcagcaccagctctgtggacagtgacatcctgagc
tccagccacagcagcgacacgctgtgtaacgcagacagcggcccgctcccgctggctaac
ggcctcgactcgcacagcatcaccagcagccggcgctccaaagcacacgaggggaagaag
gagacgtgggacacggccgaggaggactctggtacggacagcgagtacgacgagaacggc
aagagcaaagctgaggcccagtacctgtacttcaaaacagagccatactctcaggacgac
ggatctggagaaggacagaaatgtttacttgtccatgttgacaagaggatcacattggca
gcattcaaacagaatctagagccgtttgttggcgtcccctccactcagtttaaagtcttc
cgggtttatgccaacaaccaggagtttgagagtgtgcggctcaatgagacgctctcctct
ttctctgatgacaacaagatcacgattcgattgggacgtgcactgaagaaaggagaatac
agggtgaaggtgtaccagctgctagtcaatgacccagagccctgtaagtttcttttggac
actgtgtttgctaaaggcatgactgttcgacagtctaaggaggagttgctgcctcaactc
aaagaccagtgcaaactggacctcagtgtagataggtttagactcaggaagaagacctgg
aagaacccaggcacagtgtttctggattatcacgtctatgaggaggacatcaacatctcc
agtaactgggaggtgttcctcgaagtccttgaagaaccggagcggatgaagtctatgtcc
cagttagcggttctgagccgtcgctggtgcccagcccagatgaagctggaggccttccat
gaggtggtgctggagagcagcagtgtagaggaactcaaggagaaactcagtgaattgagt
ggaattcctcttgagaacttggagtttgccaagggacggggaacttttccttgtgacatt
tcggtgttggagatccatcaggatttagactggaatcctaaagtctccaccctcaatgtc
tggccactctacatctgtgatgatggagctgtgatcttctacagggacagcactgaggag
ctcatggagctgtctgaggaccagcgcaatgaactgatgaagaaggagagcagccgcctg
ctgaagacgggccaccggatcagctactccccacgcaaagagaaggccctcaaaatttac
ttagacggagggcccaccaaagaccctggacaggactga
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integrated database retrieval system
