Carassius auratus (goldfish): 113107032
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Entry
113107032 CDS
T07313
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113107032
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113107032
04131 Membrane trafficking [BR:
caua04131
]
113107032
03036 Chromosome and associated proteins [BR:
caua03036
]
113107032
Enzymes [BR:
caua01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113107032
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113107032
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113107032
Membrane trafficking [BR:
caua04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113107032
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
113107032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
113107032
NCBI-ProteinID:
XP_026124946
Ensembl:
ENSCARG00000014612
UniProt:
A0A6P6PTU3
LinkDB
All DBs
Position
8:4449984..4463981
Genome browser
AA seq
1086 aa
AA seq
DB search
MDTVPDSKGSTRSPRGTPETKRENNKPNHKKNLQEARRKGRMDRRKDEEEMSNELQNLDV
RGKTKATGTGLVYIDAFTRFHCLWDASHPECPARVSTVMEMLETEGLLGRCVRVEARAAS
EDELLLVHTKEYVELMKSTQKMTEDELKTLADKYDSVFLHPEFFTSACLAAGSVLQLVDK
VMTSQLRNGFSINRPPGHHAHADKMNGYCMFNHLAIAARYAQKQHGVKRVLIVDWDVHHG
QGIQYIFEKDPSVLYFSVHRYEDGSFWPHLKESDCSSVGSGPGEGYNINLPWNKIGMEDG
DYVTAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDPKGEMRASPQCFSILTHMLKGVAQGR
LVLALEGGYNLQSTAEGVCASVRSLLGDPCPHLISPGAPSESALKSISKTISALYPFWKS
LQMFEGGPLSDVPPLPAPVCAEVKASSLITGLVYDQRMMLHHNMWDGHHPELPQRISRIF
CQHEELGLLSRCLRIPARLATEEELGLCHSAEHISTMKSTEHMKPRDLHRLGNSYSSIYI
CNESYTCALMAAGSCFNSVQAILTGQVRNGVAIVRPPGHHAEKDTACGFCFFNTAALTAR
YAQCITHKSLRILILDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGTFFPYSEDANYDKV
GKGKGRGYNVNIPWSGGKMGDPEYLAAFHHIVMPIAREFAPELVLVSAGFDAARGDPLGE
YQVTPEGYAHLTHQLMSLAAGRVLVILEGGYNLTSISESMSMCTSMLLGDSPPPLNHLPP
PKTNATVTINKVLRALAPFWSSLRIQIPESLRLALPSPKAKGKRASAGRGKKSPHQSTPA
QSPGQTAQHLEESGLDELSKDLLSLNLNTSTSSNPSPASVPIGGARRKVKPTPQRDSAGR
EPDSPLKLTSEKARAGDGTHAEITMDRTIPDSVVTGSTAAVDDQENSVLEAAGGQATRMS
VFEVFGAQTTDMDTMYVVDPLPWCPHLESVRPVPAGGIDVFLPCEECGGDAENWICLFCY
KVLCGRYVNQHMVTHGQESGHSMVLSFADISVWCYACESYVHNKVLHEAKNAAHLMKFGE
EILPFN
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggatactgttccagattccaaaggttctactcgatcaccaagaggaacaccagaaacc
aaaagagaaaacaacaaaccaaaccataagaagaatctacaggaggcacggaggaaggga
agaatggatcggcgcaaagatgaggaggagatgagcaatgagcttcaaaacttggatgtt
cgtggtaagactaaagcaactggaacaggtcttgtctacatagatgcctttactcgcttt
cactgcctctgggatgccagtcacccagagtgtccagcgagagtgagcacagtgatggag
atgctggagacggaaggtctgctgggacgctgtgtacgagtagaggccagagctgcgtca
gaagatgagctgttactcgttcatacgaaggagtatgtagagctgatgaaatccactcag
aaaatgacagaggatgagttgaagacgctagctgataaatatgactccgtcttcctgcat
cctgaatttttcacctctgcgtgtctggcggcgggatcagttctccagctggttgataag
gtgatgacatcgcagctgcgtaacggcttctccatcaacagacctcctggtcaccacgct
catgcagataagatgaacggctactgtatgtttaatcatctggccatagcagcgcgctac
gctcagaaacagcatggagttaagcgagttctgattgtggattgggatgtgcatcacgga
cagggaatccagtatatctttgagaaggatcccagtgtgctgtatttctcagtgcacaga
tatgaagacggctcgttctggccgcacctcaaggagtctgactgcagctcggttggttca
ggaccaggagagggctataatatcaacctgccctggaacaagatagggatggaggatgga
gattacgtcacagctttccagcagctgctcctgcctgtggcctatgagttccagcctcag
ctggtgttagtggcggccggatttgactctgtgatcggtgacccaaagggtgagatgaga
gcgagtccacagtgcttctccatcctgacccacatgctgaaaggtgtagctcagggacga
cttgtgctggctcttgagggtggatataacctccagtccacagcagagggtgtttgtgct
agtgtgaggtcactgctgggtgacccttgccctcatctgatctctcctggtgctccgagt
gaaagtgccctgaagtccatctcaaagaccatctcagccttgtatccattttggaagagc
cttcagatgtttgagggtggtcctctgtccgatgtccctcctctgcccgctccagtgtgt
gcagaagtgaaggcctcctctctgatcactggactagtttatgaccagagaatgatgctt
catcacaacatgtgggacggtcatcatcctgagctccctcagagaatttcacgcatcttt
tgccagcatgaggagttgggtctgctgtcccgctgccttcggataccagctcgcctagca
acagaagaagagctgggactctgtcacagtgctgaacacataagtactatgaagagtaca
gagcacatgaaacctagagatctgcaccgactgggaaacagttacagctccatctacatc
tgtaatgagagctacacctgcgccctgatggccgctgggtcgtgttttaactccgtacag
gccatactcacaggccaggtgagaaatggcgtggccatagtccgtcctcctggtcatcat
gcagagaaagacacagcttgtggtttctgtttctttaatacggctgctttgaccgcacgc
tacgcacagtgcatcactcacaagtccctgcgcatcctcatcctcgattgggatgttcat
catggaaacggcacacagcacatctttgaggaggatgacagtgttctgtacatctctctg
catcgctacgaggatgggacattcttcccctattcggaggatgctaactatgataaggtg
gggaaagggaaaggcagaggatacaatgtcaacatcccctggagtggaggaaagatggga
gacccagaatacttggcggctttccatcacatagtgatgccgatagccagagagtttgcc
ccagagctggtgctggtgtctgctgggtttgatgcagcacgaggcgatccgttaggagag
tatcaggtgacccctgagggctacgcccacctcacccatcagttaatgagcctggctgca
ggaagagtgcttgtcatactggagggaggatataacctcacctccatctccgagtcaatg
tccatgtgcaccagcatgttgctgggagactctcctccacctctaaaccatctgccacct
ccaaagaccaatgccactgtcaccattaacaaggtcctgcgtgctctcgcccccttctgg
agctccctgagaatacagattccagagtcacttcgtttggctttgccatctcctaaagcg
aaaggcaagcgggcatcagcgggcaggggcaagaaatctcctcaccagtccacccctgcc
caaagtcctggacagacagcgcagcatcttgaggagtccggccttgatgagctcagtaag
gacctgctctccctaaatctcaacacgagtacctcatctaaccccagcccagcttcagtc
cccattggaggagccagacggaaggtgaaacccaccccacagagggattcagccggccgg
gagccagattcaccactaaaactcacgtcagagaaagccagagctggagatggcacacat
gcagagattacgatggaccggacgatcccagactctgtggtcactggaagtacagctgct
gtggatgaccaggagaactctgtgctggaggctgctggtggtcaagccaccaggatgtca
gtcttcgaagtctttggagcacaaaccacagatatggacaccatgtatgtggtggaccca
ttgccatggtgcccacacttggagtcagtgcgaccagtgcctgcaggtggcatcgatgtc
ttcctgccgtgtgaagagtgtggaggtgatgcagaaaactggatctgcctcttctgctac
aaggtgctctgcgggcgttatgtgaaccagcacatggtgacccacgggcaggagtcgggt
cactctatggtgctgagctttgctgacatctcggtctggtgctacgcttgtgagtcatac
gtccacaacaaggtgctccatgaagccaaaaatgccgctcacctcatgaagtttggagag
gagattcttcctttcaactaa
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