Carassius auratus (goldfish): 113107748
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Entry
113107748 CDS
T07313
Name
(RefSeq) NPC1-like intracellular cholesterol transporter 1
KO
K14461
Niemann-Pick C1-like protein 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caua02000
]
113107748
Transporters [BR:
caua02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
113107748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
MMPL
Folate_rec
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
113107748
NCBI-ProteinID:
XP_026126228
Ensembl:
ENSCARG00000034713
UniProt:
A0A6P6PYI8
LinkDB
All DBs
Position
8:complement(24213467..24225070)
Genome browser
AA seq
1453 aa
AA seq
DB search
MIYELDWLLSILVGGGNIRPDKTLIIISITLCLSNESEKAFHFLLSFSTVPEQAEVKQRS
LCYLKLLTSSCLLLSTGHNTPHAKKCRTTREMHFHRKSWTWSVLLFTLAVCMVLASAQHE
PGYCSFYEDCGLNPAVEGSLIPPRVPCKDYRKAVNVTGDHYELFKSVCPMLAHGEGNTLA
CCSIRQLTALQSSLTLSKAVLIRCPSCADNFAHMHCATTCSPNQSQILKITKTANITQPT
GIVKEAVVGYEAYVSTNFSDASFRSCKNVRIPATGGYAIATMCGRYGSTLCTPQRWLDFQ
GDSSNGLAPLDINFKLLSDSQTAGLPPGAVLFAGTALNCNETTPTGGEACSCQDCEQSCP
AVPQPPPLPKPFMIGRLDGVLVISLTVFSCIFFLIMCYVVLECTVHIRKSKGTQMSMSTK
DQNENEIEHKISPKDVTCSDKASLATQEFLGSLFQTWGTIMARYPLIVLPVCLVVVLVFA
VGIKDIELTTDPVQLWSAPESRAMREKSFHDAHFDPFYRTNQLILTAPDKPNHYYDSLLF
GEQNFSGIISKDLIIELLELQQKIQAIEFWSDGLNRTASLKDVCYAPLNPDNPSLTDCAV
NSLPQYFQNSIDNLNAKANMTELGVTKEVDWRDHFIYCVNSPLSFKDITALGMSCMADYG
GPVFPFLAVGGYENEEYISAEALILTFSLNNYARTDVKFKVAEEWESRFLKIVQEYQKNP
NTNFTFAYMAERSLEDEINRTTAEDIPIFMISYAVIFLYIAVALGEYSSCKRILVDSKFL
VGLGGILVVGCSVIASMGFYAWIGVPSSLVILQVVPFLVLAVGADNIFIFVLEYQRDMRR
PGEKREEHIGRVLGNVAPSMLLCSLSESVCFFLGALSTMPAVKSFALYAALAVLMDFILQ
MTAFVALLSLDARRQDANRCEIACCVTVHTPHPSEPNQGILLPLMKKYYAPALLHPVSRV
LVMVVFLAMFFGCVFLLFHVKVGLNQELAMPSDSYMLDYFAYLYKYFEVGVPTYFITTKG
FNFTSEEGLNAVCSSVGCDQFSFTQKIRYATEYPERSYLAIPASSWVDDYIDWLNPGSKC
CRIYTTGANIGEFCPANETGIFTCAKKCMSAPQNGVLRPSVEDFNRFLPDFLSNRPDLQC
PKGGLGAYDKAVVRDKETGEIIASRFMAYHTPLVNSQEFTAALEKARELAHDITLTMRNV
TGTSQDFEVFPYTVTYVYYEQYLTIVNEGLFNIAVCLIPTFVVCCILLGMDLRSGFLNLL
TIVMITVDTVGVMTLWGIDFNAVALINLVTAVGISVEFVSHLTRSFALSIRPTKVERAKE
ATANMGSAVFAGVAMTNLPGIVVLALAKAQLIQIFFFRLNLVITLLGLVHGLIFLPVLLS
FLGPGVNNAILLQIQEKKAKEMELNSKATYDNISFENHEKSNSEIPVEPSNPVKADNVPK
AAQEPSEIEIDIM
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgatctatgagctggattggcttttatccattctggttggcggtggaaacatcaggcca
gataagaccctgatcatcatcagtatcactttatgtttatccaatgagagtgagaaagcc
tttcatttcctcctgtctttctctactgtaccagaacaggcagaagtcaagcagagatct
ctctgctacctgaaactccttacatcctcctgcctccttctctccactggacataacact
ccacacgcaaagaagtgcaggacaacaagagaaatgcacttccaccgaaagagctggact
tggtccgttttattgtttacacttgctgtttgcatggttctcgcaagtgctcagcatgaa
ccaggctactgctctttctatgaggactgtggcctaaaccctgccgttgaggggtctctt
atcccacctagggttccctgtaaggactacagaaaagctgtgaatgtcacaggagaccac
tatgaactttttaaatctgtatgcccgatgttggcccacggggagggtaacacactggcc
tgctgctccatcagacagctcaccgctctacagagcagcctgacgctgtccaaagctgtg
ctgatccgctgcccgtcctgcgccgacaactttgcgcacatgcactgcgccaccacctgc
agccccaaccaaagtcagattttaaagattacgaaaaccgcaaacatcacgcaacccact
ggcattgtcaaggaagctgtggtgggttacgaggcttacgtatccaccaacttctccgat
gcatcgtttaggtcctgcaaaaacgtacgaatccccgccactggaggctatgccatcgcc
acaatgtgtggccgctatggttcgacactgtgtacgccgcagcgctggttagatttccag
ggtgactcgagcaatggactggctcctctggatattaacttcaagctcttgtcagacagc
cagaccgctggactcccacccggagcggttctgtttgcaggaacagcattgaattgtaat
gagacgaccccgacaggtggcgaggcctgttcctgtcaggactgcgaacaatcctgtcca
gctgtaccacagccaccacctttaccaaaaccattcatgattggtcgactagatggtgtc
cttgtcatcagcctcacagtcttctcctgcatctttttccttataatgtgttatgtagtt
ttagagtgcactgtccacatacgaaagtcaaagggtactcaaatgagcatgagcactaag
gaccaaaacgaaaatgagattgaacataaaatcagtcctaaagatgtcacatgctctgat
aaagccagtcttgccactcaggagttcctggggtctcttttccagacctggggaaccata
atggctcgatatcctctgatagtactcccagtctgccttgtggttgtgttggtatttgca
gtgggaataaaagacatagaactcacaacagatcctgtccagctctggtcagcgcccgaa
agtcgtgccatgcgagagaagtccttccatgatgcacattttgatccattttaccgcacc
aatcagctgatcctgaccgctccagacaagcccaaccactactatgactccttactcttc
ggcgagcagaacttcagtggcatcatttctaaagatttgatcatagagctgttggagctt
cagcagaaaatccaggcaattgaattctggtcggatggactaaaccgcactgcaagtctt
aaagatgtttgctatgcaccactcaatccagacaacccctcgttaacagactgtgctgtc
aacagtctgccgcagtacttccaaaatagcatcgacaacctgaatgccaaagcaaacatg
acagagctcggcgtgacgaaagaggtggactggagggaccacttcatctactgcgtaaac
tctccgttatcatttaaagacatcactgctcttggcatgagttgtatggcagactacggt
ggccctgttttccccttcctggctgtaggaggatatgagaatgaggaatacatctctgct
gaggccctgatccttaccttctccctgaacaattacgcacggactgatgttaaatttaag
gtagctgaagagtgggaaagcaggttccttaaaattgtgcaggagtatcaaaaaaacccg
aacacaaacttcacatttgcctacatggccgagaggtccctagaggatgagataaacaga
acaactgcagaggacatccccatattcatgataagctacgctgtcatcttcctgtacata
gccgtggctcttggggaatattcatcatgcaagcgtatcctggtagattcaaagttcttg
gttggtctgggtggtattctggtcgtgggctgctctgtcatagcctcaatgggtttctat
gcctggattggggttccgtcctctctggtcattctgcaggtcgtacctttccttgtgctt
gctgtgggagctgataacatcttcatttttgttctggagtatcagagagatatgcgcaga
ccaggagagaagagggaggaacacattgggagagttcttggaaatgtggctcccagcatg
ctgctttgcagtttgtctgaatctgtttgtttcttcctgggtgctttgagcactatgcca
gcagtgaagtcttttgccttatatgcagcactggctgtgctcatggacttcattctgcag
atgactgcctttgtggctctgctctcacttgacgctcggcgacaagatgcaaatcgttgt
gagatagcttgctgcgtcactgtacatactccacacccgtctgaacccaaccagggcatc
cttctcccattaatgaaaaaatactacgcccctgcactgctccaccctgtcagcagagta
ttagtgatggtggtgttccttgcaatgttctttggctgtgtgttcctcttgttccatgta
aaagtgggcttaaatcaggaattggccatgccatctgactcctacatgttggactacttc
gcatacctctataagtatttcgaagttggtgtgccaacgtattttatcacgaccaaaggg
ttcaatttcaccagtgaggagggcctaaacgcagtgtgttccagtgtggggtgtgaccag
ttctctttcacccagaagatccgatacgccactgagtaccctgagcgatcttacttggca
atcccagcatcctcctgggtggatgactatatcgactggctgaaccctggatccaaatgt
tgtcgtatctatacgactggcgcaaacataggcgaattttgtcctgccaatgagacgggt
atcttcacgtgtgccaagaagtgtatgagtgccccccaaaatggggttctgcgacctagt
gttgaggattttaacagattcctgccagactttcttagcaacagacctgatctacaatgt
ccaaaaggtggtttgggagcttatgataaagctgtggttagagacaaggaaacaggggaa
ataatagcgtctcggttcatggcctaccacactcctctggtcaactctcaggagttcacg
gcagcgctggagaaggccagagaactggcgcatgatatcacactgaccatgaggaacgtc
accggcacctctcaagactttgaggtcttcccatacactgtgacgtatgtgtattacgag
cagtatctgaccatcgtgaatgagggtttgttcaacattgccgtgtgtctgatccccaca
ttcgtggtgtgttgtatcctgctcggcatggacttgagatcaggctttctgaacctgctc
accatagtgatgatcactgtggatacggtcggtgtcatgacgctgtggggcatcgacttc
aacgctgtggcgcttatcaaccttgtgacggccgtcggtatatcagtggagtttgtgtct
catttaacacgctcatttgcactcagtattcgccccacgaaggtggagagggcaaaggaa
gccacagctaacatgggcagtgcagtgtttgctggagttgcgatgaccaatctgccagga
atagtggtgttggcattagctaaagcacagctcatccagatcttcttcttcagactcaat
ctggtcatcactctgctcggcctggtccacggcctcatatttctgcccgtgctgctcagt
ttcttaggtcctggtgtgaacaacgccattctgctacagattcaagagaagaaagccaag
gaaatggaactcaacagcaaagctacatatgacaacattagcttcgaaaaccatgaaaag
tcaaacagcgaaatccctgtggagccctcaaatccagtaaaggctgacaatgtccccaag
gccgcccaagagcccagcgaaattgaaattgacattatgtag
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