Carassius auratus (goldfish): 113109510
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Entry
113109510 CDS
T07313
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113109510
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113109510
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113109510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
113109510
NCBI-ProteinID:
XP_026128854
Ensembl:
ENSCARG00000015087
UniProt:
A0A6P6Q5P2
LinkDB
All DBs
Position
10:951403..971702
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AA seq
689 aa
AA seq
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MDDWEEDQGPVVSCSSGFGLSSRGADGGFKSFYTGSTGNGKANNEDGDGSSWKTTAGDGF
RGRGGRGGSRGGRGGFRNTFKSETDENENNEGWKDEGQGRGRGGSRGGFRGGFRGGFRDG
GNEETGRRGFGRENDENGTDEGWKGGEGRGRGRGGFRGGFRDGSGDEETGKRGFGRGGFR
GRNEEVFSKASTADKPDQEAGENAGPKVVYVPPPPPEEESSIFSHYATGINFDKYDDILV
DVSGSNPPKAIMTFDEAGLCESLRKNVTKSGYVKPTPVQKHGIPIISAGRDLMACAQTGS
GKTAAFLLPILQRLMADGVAASKFSEVQEPEAIIVAPTRELINQIYLEARKFAYGTCVRP
VVVYGGINTGYTIREVLKGCNILCGTPGRLLDIIGRGKVGLSKLRYLVLDEADRMLDMGF
EPDMRKLVGSPGMPSKEDRQTLMFSATYPEDIQRMAADFLKVDYIFLAVGVVGGACSDVE
QTIIQVDQYSKRDQLLDLLRSTGTERTMVFVETKRSADFIATFLCQEKLSTTSIHGDREQ
REREKALSDFRTGQCPVLVATSVAARGLDIEQVQHVVNFDLPSSIDEYVHRIGRTGRCGN
IGRAVSFFNPESDTPLARSLVKVLSGAQQEVPKWLEEIAFSAHGTTGFNPRGKVFASTDT
RKGGSFKTDEPPRASAPTPAAAADDEEWE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggatgactgggaggaagatcagggccctgttgtatcctgcagttcaggttttggtctg
agctctagaggtgcagatggaggattcaagagcttctatacaggaagtacaggaaacggg
aaggcaaacaatgaagatggtgatggcagctcatggaagacgactgctggtgatggattc
aggggcagaggaggaaggggaggatcacgaggaggaagaggaggcttcagaaataccttt
aaatcagaaactgatgaaaatgaaaacaatgagggttggaaagatgaaggccaaggaaga
ggtcgtggtggatcccgtgggggtttccgcggtggatttcgtggtggtttccgtgatggt
ggaaatgaagagactgggagaagaggctttggaagagaaaatgacgaaaatggcacagat
gagggttggaaaggaggtgaaggccgaggaagaggtcgtggaggctttcgtgggggcttc
cgtgatggtagcggtgatgaagagaccggaaaaagaggctttggaagaggaggtttcaga
ggacggaatgaggaagtgttttccaaggcttcaacagcagacaagccagatcaagaagca
ggtgaaaatgcaggacccaaggttgtctatgtgccgcctccccctccagaagaggagagt
tcaatattttcccattatgccacgggcattaattttgacaaatatgatgacatccttgtg
gatgtgagtggcagcaatcctccaaaggctattatgacttttgatgaagcaggactttgt
gaatcactgagaaagaatgtaacgaagtctggatatgtgaagcctactcctgtccagaaa
catgggattcccattatttctgctggacgagatctaatggcttgtgcccagaccggatca
ggaaaaacggcggccttcctgctgcccatccttcagcggctgatggctgatggtgtggct
gccagcaagttcagcgaggtgcaggagcccgaggccataatcgtggcccccaccagagag
ctcatcaatcagatctatctggaggccaggaagtttgcatatgggacctgtgtgcgtcct
gtggtggtttatggtggaataaatactggatacacaattcgagaggtgttaaagggctgc
aatattttgtgtgggaccccaggacgattgcttgacatcatcggtcgtggaaaggttggc
ctgagtaagctgcggtatttggttctggatgaagcagacaggatgctggacatgggcttc
gagccagatatgcgtaagctggtgggatctccaggcatgccttcaaaagaggatcgacaa
accctcatgttcagcgccacctaccctgaagatattcaaaggatggctgcagattttttg
aaagtggactacattttccttgctgttggtgtggttggtggagcatgcagtgatgtggag
caaactatcattcaggtggaccagtactccaagagagaccagctgcttgatctgctcaga
tctacagggactgagcgcacgatggtctttgttgaaaccaaaagaagtgctgatttcatt
gcaacatttctctgccaggagaagctgtccactacaagcatccatggtgatcgggagcag
agagagcgagagaaggctctcagtgattttcgcacaggccagtgtccggtgctggtggcc
acgtctgtcgctgccagaggcctggacattgagcaggtccagcacgttgtgaatttcgac
ctgcccagcagcatcgacgaatacgtccatcgcatcgggagaaccggacgctgtgggaac
atcgggcgggccgtgtccttcttcaacccagagtctgacactccattagctcgctctctg
gtcaaagttctgtctggggcccaacaggaagttcccaaatggctggaggaaatagctttc
agtgctcatggaacaacaggcttcaaccctcgtggaaaagtgtttgcatctacagacaca
cgaaagggagggtccttcaagacagatgagccgcctcgagcatccgccccaaccccagca
gctgctgcagatgatgaggaatgggaataa
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