Carassius auratus (goldfish): 113115197
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Entry
113115197 CDS
T07313
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caua03016
]
113115197
Enzymes [BR:
caua01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
113115197
Transfer RNA biogenesis [BR:
caua03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113115197
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Transketolase_C
Flavodoxin_5
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
113115197
NCBI-ProteinID:
XP_026138390
Ensembl:
ENSCARG00000052132
UniProt:
A0A6P6R0Q5
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Position
15:14259888..14315676
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AA seq
754 aa
AA seq
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MLFLALVSCLLYCTVGAEKSDALHDVWDFTESCLLTVWQNRLCVYTTAAVLIGVWFTVNM
LLKKKKMVDPISPRLDKSVKNQKLSPETEKVIHVSGVKVFYGSQTGTAKGFAEELAGDVS
AQGIQCEVIDMKDYDPEDRLAEECTSKMLCVFLVATYTDGQPTESAEWFCKWLEEASTDF
RYGKTFLKGMRYAVFGLGNSVYVGHYNTVSKNIDKWLWMLSAARIMTRGEGDCNVVKSRH
GSVQADFQAWKTKFLNRLQALAKGEKKACSGKCKSSSCKNKKKHKEEAEDGQSHAEKNSS
EEELMESSSDAESSAEEEKAHGSVIDMEDLGNVMNRMKKAKRMEGDEEDSQRVKLSKQNG
VRKSESEEERREMITPALRDALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGI
ESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKIIQEAVENHKNMIRQFRG
VPGVRPERFEEGLTVKHCALSLVGEPIMYPEINSFLRLLHQQNISSFLVTNAQFPEEIRS
LVPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFLDSLRALGEKQQRTVYRLTLVKAWNV
DELKAYADLIALGQPDFIEVKGVTYCGESSASSLTMANVPWHEEVIYFVQQLANLLPDYE
IACEHEHSNCLLLAHHKFKVDGEWWTWIDYERFQERVQEYEESGGTKSFSAMDYMAKTPS
WAIFGARERGFDPSDTRFQRKNKTKDISGCLEGS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgttatttttagcgctggtatcgtgtttgctgtattgtacagtcggcgctgagaagtca
gatgctttgcacgatgtttgggacttcactgagagctgcctgctgactgtgtggcaaaac
aggttatgtgtgtacactactgctgctgttctcataggagtctggtttactgtgaacatg
cttctcaaaaagaaaaaaatggtcgaccctataagtccccggcttgataaatctgtgaaa
aatcagaaactttcacctgaaacagaaaaagtaattcatgtttctggggttaaagtgttc
tatggatcacagacaggaactgcgaagggttttgcagaagagctcgctggagacgtcagt
gctcaggggatccagtgtgaggttatagatatgaaagactacgacccggaggatagactg
gctgaggagtgcacaagcaagatgctctgtgtgttcctggtggccacatacacagacggg
cagccaactgagagcgccgaatggttctgtaaatggcttgaggaggcctccacggacttc
cggtatgggaaaaccttcctgaagggaatgagatatgccgtctttgggctggggaactcc
gtttatgtcggccattacaacactgtcagtaagaacattgataagtggctgtggatgctg
agcgctgcccggatcatgaccagaggagaaggcgattgtaatgttgtgaagagccgacac
ggcagcgtgcaggccgacttccaggcctggaaaacgaagttcttgaaccggctgcaggcc
ctggccaagggtgagaagaaagcctgctctggcaagtgcaagagcagcagctgcaagaat
aagaagaaacataaggaggaggcagaggacggccagtcgcacgctgagaagaacagctct
gaggaggagctgatggagtccagcagtgatgcagagtcctccgctgaggaagagaaggct
cacggctccgtcatcgacatggaggacctcgggaatgtgatgaatcgtatgaagaaagcc
aagaggatggagggagatgaagaggactcccaaagggtgaagctgtcaaagcagaatgga
gtgaggaagagcgagtcagaggaggagcggagagagatgatcactccagccttgagagat
gctctgactaaacaagggtacaaactaataggaagtcactctggggtaaaactgtgtcgt
tggaccaagtcaatgctgagaggaagaggaggctgctataaacacaccttctatgggatt
gaatcacaccgctgtatggagaccacgccgagcctggcctgtgccaacaaatgtgttttc
tgctggagacaccacaccaacccggtgggcaccgagtggcgctggaaaatggacccggct
gagaagatcattcaagaggctgtggagaaccacaagaacatgattcgccagttcagaggt
gttccaggagtgcgtcccgagcgctttgaggagggcctcactgtgaagcactgtgctctg
tctctggtgggtgaacctatcatgtatcctgagatcaactcattccttcgactccttcac
cagcagaacatatccagcttcctcgtcactaacgcccagttccctgaggagatcaggagt
cttgtgcctgttacacaactttacgtcagcgttgatgccagcaccaaggacagtctgaag
aaaattgaccgtcccctcttcaaagacttctggcagcgctttttggacagtctcagagcg
cttggtgaaaagcaacagcgtacggtgtacagactgaccctggtgaaggcctggaatgtg
gatgagctgaaggcctacgcagatctcatcgcccttggacagccagatttcatcgaggtc
aagggagtgacgtactgtggtgagagctcagccagtagcctgacaatggccaacgtaccc
tggcacgaggaggtcatctacttcgtgcagcagcttgccaacctgctcccagactatgaa
attgcctgcgaacacgagcactccaactgtctgttacttgcgcaccacaagtttaaagtc
gacggggagtggtggacatggattgactacgaacgcttccaggagcgcgttcaagaatac
gaggagagtgggggcaccaagagcttctcagcgatggactatatggccaagacccccagc
tgggccatttttggggcccgggagaggggatttgacccctcggacacacgcttccagaga
aagaataaaactaaagatatctcaggatgtttagagggcagttga
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