KEGG   Carassius auratus (goldfish): 113117180
Entry
113117180         CDS       T07313                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113117180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:caua03041]
    113117180
Spliceosome [BR:caua03041]
 Complex A
  U2 snRNP components
   U2 related factors
    113117180
 Complex B
    113117180
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    113117180
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 DUF2067 Usp
Other DBs
NCBI-GeneID: 113117180
NCBI-ProteinID: XP_026141436
Ensembl: ENSCARG00000012376
UniProt: A0A6P6R7F6
LinkDB
Position
17:9392220..9395662
AA seq 237 aa
MSEELAKQLSNYKAQLQQVEAALSTDPDNEDLLKLQKDLQEVIELTKDLLTSQPVEGATS
TKSSEAVAPTRSWRVGDHCLATWNQDGQVYEAEIEEIDTENGTAAVTFAGYGNAEVIPLH
VLKPVEEGRSREEEGGKPKSKKEMLAEQREYKKKKAQKKVQRMKELEQEREDQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtctgaagagttggcaaagcagttgagcaattataaagctcagctccagcaggtggaa
gcggcgctctctacagatccagataatgaagatctgcttaaactgcagaaggacctccag
gaggtgattgagttgacaaaagacctgttgacatcacagccggtggagggtgcaaccagc
accaaaagctcagaggcagtcgctcccactcgcagctggagggtcggagaccattgcttg
gccacctggaaccaggacggacaggtatatgaagcagaaattgaagagattgacactgag
aacggcacggcagctgtcaccttcgctggctatggtaatgcagaggtgataccgcttcat
gtgctcaaaccagtggaagaaggcaggagcagagaagaggaggggggaaagccaaaatcc
aagaaagagatgctggcagagcagagggaatataagaagaaaaaggcccagaaaaaggtg
cagcgcatgaaggagctggagcaggagagagaagatcagaaatccaaatggcagcagttt
aacaataaagcctattccaagaataaaaaaggacaggtgaagaggagtatatttgcatct
ccggagagtgtgaacggaaaagttggcgttggcacgtgtggtatcgcagataaacccatg
actcagtacaatgacacttcaaaatataacgtcaggcaccttatgccccagtga

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