Carassius auratus (goldfish): 113119093
Help
Entry
113119093 CDS
T07313
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113119093
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113119093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_6
zf-RING_5
MRP-S31
Y1_Tnp
DUF4407
Laminin_II
DUF1043
Motif
Other DBs
NCBI-GeneID:
113119093
NCBI-ProteinID:
XP_026144068
UniProt:
A0A6P6RFU3
LinkDB
All DBs
Position
19:complement(616717..620183)
Genome browser
AA seq
539 aa
AA seq
DB search
MAEASVFSVEQFSCPVCLDLLKDPVAIPCGHSYCMSCITDCWDQEDQKRVYSCPQCRQTF
SPRPALGKNTMLAEVVEKLKKTKLKAAVPAGSGDVECDICTGRKHKAVKSCLVCLESYCQ
THFERHEEFRSGKRHKVTDATGRLQQMICQKHEKLLEVFCRTDQQCVCVLCAMDEHKNHE
TVSTAAERTEKEKHLKETQSEIQQRIQQRQKDLEQLRDAVESHKRSAQTAVEDSERIFTE
LIRSIERSRSEVTQRIRDQEKTAVSRAEGQMERLEQEIEDLKKRNTELEQLSHTDDHIHF
LQSLQSLSAPPESTENISDSFLFSFDGVRESVRQLRLKLEDFCKEEMKKISVSNIVPRSR
EDFLQYRHQFTLDPNTAQKRLCLSEGNRLVTYTDTAQPYPDHPDRFDYYRQVLCRESVSG
RCYWELEWSGTGVFISVSYKSISRKGSGYECVFGRNDQSWRLHCSPSIFSFWHDNKETKL
PVSSSCRRIGVYVDHRAGTLSFYSVSDSMNLIHTVQTTFTQPLYPGFNVWDHQSSVKLL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccagtgttttttcagtcgagcagttcagctgtccagtgtgtctggatctc
ctgaaggatcctgtggccattccctgtggacacagttactgtatgagctgcattacagac
tgctgggatcaagaggatcagaagagagtctacagctgtcctcagtgcagacagaccttc
agtccaagacctgctttaggtaaaaacaccatgctggctgaagtggtggagaaactgaag
aagaccaaactaaaagctgctgttcctgctggatctggagacgtggagtgtgacatctgt
actggaagaaaacacaaagctgtcaagtcctgtctggtgtgtctggagtcttactgtcaa
actcactttgagcgtcatgaagagtttcgttcaggaaagagacacaaagtgactgatgcc
actggacgactgcagcagatgatctgccagaaacatgagaagcttctggaggttttctgt
cgtactgaccagcaatgtgtttgtgtactttgtgcaatggatgaacataaaaaccacgag
actgtgtcaactgcagcagagaggacagagaaagagaaacacttgaaggagacacagagt
gaaatccagcagagaatccagcagagacagaaagatcttgagcagctgagagacgctgtg
gagtctcataagcgctctgcacagacagcagtggaggacagtgagaggatctttactgag
ctcatccgctccattgagagaagccgctctgaggtgacacagcggatcagagatcaggaa
aagactgcagtgagtcgagctgaaggacaaatggagcgactggagcaagagattgaagat
ctgaagaagagaaacactgagctggagcagctttcacacacagacgatcacatccatttc
ctgcagagtcttcagtctctctcagctcctcctgaatctacagaaaacatctctgacagt
ttcctcttttcttttgatggagtgagagaatctgtccgtcagctgagactcaaactggag
gatttctgcaaagaggagatgaaaaagatatctgtcagtaacattgttcccaggagcaga
gaggacttcctacaatatcgtcatcagttcactctggatccaaacactgcacagaaacgt
ctctgtctgtctgaagggaacagattggtgacttacactgacacagctcagccgtatcct
gatcatccagacagatttgattattatcgtcaggtgttgtgtagagagagtgtgagtgga
cgctgttactgggaactggagtggagtgggactggtgtgtttatatcagtgtcatataag
agcatcagcaggaagggatctggttatgagtgtgtgtttggacgtaatgatcagtcctgg
agactgcactgctctccctctatcttctcattctggcatgataacaaagagactaaactc
cctgtttcctccagctgcaggagaataggagtgtatgtggatcacagagcaggaactctg
tccttctacagcgtctctgactcaatgaacctcatccacacagtccagaccacattcact
cagcccctctatcctgggtttaatgtttgggatcatcaatcatcagtaaaactattataa
DBGET
integrated database retrieval system
