Carassius auratus (goldfish): 113120906
Help
Entry
113120906 CDS
T07313
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113120906
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113120906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
SPRY
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
U-box
zf-RING_5
Phage_GP20
DUF4407
TAN
TssC
Motif
Other DBs
NCBI-GeneID:
113120906
NCBI-ProteinID:
XP_026146825
Ensembl:
ENSCARG00000008290
UniProt:
A0A6P6RND2
LinkDB
All DBs
Position
2:22510914..22513840
Genome browser
AA seq
558 aa
AA seq
DB search
MAESSVSLAQDEFSCSICLDLLKDPVALTCGHSYCMSCITDCWDQEDQKGVYSCPQCRQT
FTPRPVLGKNTMLAEVVEKLKMTKLQAARPAQCYSGSGDVECDVCTGDKNKAIKSCMVCL
NSYCQYHLEQHETFFRGKRHNLMDATGKLQEMICPLHDKLLEIFCHSEQICICLLCMVEQ
HKHHNTISVAAERTEKQRQLETTQKIFQKKIQERQKELEELKEAVESHKRSAQTAVEDSE
RIFTELIRSIERSRSEVTQLIRDQEKAEVSRAEGQLEQLKQEIEDLRRRDAELEQLSHTD
NHIRFLQSFQSLSVPPGSTDSPKIVVSSCLFFDDISKSVSHLREKLEHFCREEMEKISDI
VKYIEFISTPEPKKREEFLQYYRRFTLDENTAHKYLCLSQGNRMTTKTNTDQLYPDHPDR
FDRFTQVLCRESVCGRCYWEVEWSGIGVYISVSYKNISRKGCGNECAFGYNDQSWSLYCF
PSNYCKYSFLHNNGWTKVPEVSSSSRIGVYVDHSAGTLSFYSVSDTMTLIHRVQTTFIQP
LYAGFRAYGLVKLYDITR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatccagtgtttctttggctcaggatgagttcagctgttcaatctgtctggat
ctactgaaggatccagtagcccttacctgtggacacagttactgtatgagctgtattaca
gactgctgggatcaggaagatcagaagggagtctacagctgccctcagtgcagacagacc
ttcactcctagacctgttttaggtaaaaacaccatgctggctgaagtagtggagaaactc
aagatgacaaaactccaggctgctcgtcctgctcagtgttactctggatctggagatgtg
gagtgtgacgtctgtactggggacaaaaacaaagccatcaagtcctgtatggtgtgtctg
aactcttactgtcaatatcatcttgaacaacatgagactttcttcagaggtaagagacac
aatctaatggatgccactggaaaactgcaggagatgatctgtcctctacacgataaacta
ctagagatcttctgtcatagtgaacaaatatgtatttgcttgctgtgtatggtagagcaa
cataaacatcacaacactatatcagttgcagcagagaggactgagaaacagagacagttg
gaaactacacagaaaattttccagaagaagatccaggaaagacagaaggagcttgaggag
ctgaaagaggctgtagagtctcacaagcgctctgcacagacagcagtggaggacagtgag
aggatctttactgagctgatccgctccattgagagaagccgctctgaggtgacacagctg
atcagagatcaggaaaaggctgaagtgagtcgagctgaaggacaactggagcaactgaag
caggagattgaagatctgaggaggagagatgctgagctggagcagctttcacacacagac
aatcacatccgtttcctccagagtttccagtctctctctgttcctcctggatctacagac
tcacccaaaatcgttgtcagttcttgtctcttttttgatgatattagtaaatctgtttct
cacctgagagagaaactggagcatttctgcagagaagagatggagaagatatctgatatt
gtaaaatacattgagtttatatcaaccccagaaccaaagaaaagagaggagtttctacaa
tattaccgacggttcacactggatgaaaacacagcgcataaatacctctgtctgtctcag
gggaacagaatgactactaaaactaacacagaccagctgtatcctgatcatccagacaga
tttgatagatttactcaggtgttgtgtagagagagtgtgtgtggacgctgttactgggag
gttgagtggagtgggataggagtgtatatatcagtgtcatataagaacatcagcaggaag
ggatgtggtaatgaatgtgcatttggatataatgatcagtcctggagtttatattgcttt
ccttccaattactgcaaatactcattcttgcacaacaacggatggactaaagtccctgaa
gtgtccagctcctctagaataggagtgtatgtggatcacagtgcaggaactctgtccttc
tacagcgtctctgacacaatgaccctcatccacagagtccagaccacattcattcagcct
ctctatgctgggtttagagcttatggattagtgaaactgtatgacatcacaagatag
DBGET
integrated database retrieval system
