KEGG   Candida auris: CJI96_0000684
Entry
CJI96_0000684     CDS       T04850                                 
Name
(RefSeq) DNA ligase (ATP) CDC9
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
caur  Candida auris
Pathway
caur03030  DNA replication
caur03410  Base excision repair
caur03420  Nucleotide excision repair
caur03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:caur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CJI96_0000684
   03410 Base excision repair
    CJI96_0000684
   03420 Nucleotide excision repair
    CJI96_0000684
   03430 Mismatch repair
    CJI96_0000684
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:caur03032]
    CJI96_0000684
   03400 DNA repair and recombination proteins [BR:caur03400]
    CJI96_0000684
Enzymes [BR:caur01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CJI96_0000684
    6.5.1.6  DNA ligase (ATP or NAD+)
     CJI96_0000684
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CJI96_0000684
DNA replication proteins [BR:caur03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CJI96_0000684
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CJI96_0000684
DNA repair and recombination proteins [BR:caur03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CJI96_0000684
   NER (nucleotide excision repair)
    Other NER factors
     CJI96_0000684
   MMR (mismatch excision repair)
    Other MMR factors
     CJI96_0000684
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 40028047
NCBI-ProteinID: XP_028890155
LinkDB
Position
1:1479032..1481173
AA seq 713 aa
MRFFGSKKDQPDSLKRKRSGDDEKRAKVQKIQRTVEAKPITSSSPNNGTSESSKEANVER
DGESSSEGDAEDAAKLIKLSEQSHKHKDLAEGNKLPYSAITNTLEKIEHESSRLKITALV
SEFFLETLEQYRSPDKLVKIVYLFINRLGPDYEPDLELGLGETLLIKAISECYGRAPAHI
KKDYHEVGDLGLVAQKSRSGQPTMFKPAPLDVETVFENLTKIAKATGKDSQAKKVGIIHR
MLTACDLKSNEAKFLIRSLEGKLRVGLAEKTVLVALAQALLQYEKKGERVLPSTLLKAED
TIKEAFSLVPNYEIVIRKSFEHGILNLLDHCSLTPGVPLKPMLAKPTKSVGEILDRFQGQ
EFTCEYKYDGERAQVHLLEDGMVRIYSRNSEDMSERYPDLVGIIKDFIKKTDDDTSSKSP
TSLILDCEAVAWDREAKKILPFQVLSTRKRKDVSEDSIKVHICLFAFDLLYHNGTSLITK
SLQERRDILFNNFQTIDGKFQFATYKNSSDLDELQAFLDQSVKDSCEGLMVKMLHGSESF
YEPSKRSRNWLKLKKDYLSGVGDSLDLVVIGAYIGRGKRTGGYGGFLLASYNDDTGEYET
ACKIGTGFSEEDLATLSTKLKPTEISQPKAFYTYDTTSSNALPDVWFEPTTVFEVLTADL
SLSPVYKAAHSEYGKGISLRFPRFIRVRDDKGVEDATTSTQVAELYDRQANIN
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgaggtttttcggcctgaagaaggaccagcctgattccctcaagagaaagcggctgggt
gacgatgagaagagggccaaggtacagaagatccaaagaacggtggaggccaagcctata
acgagcagcctgcccaacaatggcacgtcagagagttcaaaggaggcgaatgttgagcga
gatggcgagtccctgagtgaaggtgatgctgaggatgctgcaaagcttatcaagctctca
gagcaatctcacaaacataaagaccttgctgaaggcaacaaactcccgtactccgcgata
actaacactttggagaagatcgagcacgagagctctcgattgaaaatcactgctcttgtc
tctgaattcttccttgagactttggagcaatacagactgcctgacaagctcgtgaaaatt
gtataccttttcatcaatagattgggacctgactatgaacctgatcttgaattaggtttg
ggagagactcttttgatcaaggcaatcagcgaatgttacggtagggctcctgcccacatc
aagaaagactatcatgaggtcggtgacttgggccttgtggcccaaaagtccaggtccggt
cagcccacgatgttcaagccagcaccactagatgttgaaaccgttttcgagaatctcact
aagatcgccaaagcaacaggaaaggactcacaagcaaagaaagttggtatcatacataga
atgttgaccgcatgtgacttaaagagcaacgaagccaaatttcttatcagatcccttgag
ggtaagttgagggtcggccttgctgaaaagactgtgcttgttgctttagcccaagccctt
ctccaatatgagaaaaagggcgaacgtgtattgccaagtacgctactcaaggctgaggat
accatcaaagaagccttctccttagttccaaactacgagattgtcatccggaagagcttt
gaacatggcatattgaacttgctcgatcactgcagcttgacacctggtgtgcccttgaaa
cccatgttagctaagccaacaaagtctgtgggtgaaatcttggacagatttcaaggacag
gagttcacatgtgaatacaaatatgacggtgaaagagctcaagtgcatctcttagaggat
ggaatggttagaatttactcaaggaattctgaagacatgtctgaaaggtatccagactta
gtcggtatcattaaggacttcatcaagaagaccgatgatgacacctcttcaaaaagtcct
acctctctcatcttggactgtgaagcggtggcatgggatagagaagcgaagaagattctt
ccctttcaagtcctctcgacaagaaaaagaaaagatgttagcgaggacagcattaaagtg
catatctgtctttttgcatttgacctattataccacaacggaacctcgctcataacgaag
tctttgcaggagaggcgagatatacttttcaataacttccaaacaatcgatggcaaattc
caatttgccacgtataaaaattcttcggatctcgatgaacttcaggcattcttggatcaa
tctgttaaggactcttgtgaaggtttgatggtgaagatgcttcatggaagtgagtcattt
tacgaaccctcgaaacggtcgagaaattggttaaaactcaagaaagattatttgagtggt
gtcggtgactccttagatttagtggtaattggagcctatattggaagaggaaagaggact
ggtggctacggtggttttcttttggcgtcttacaacgatgataccggtgagtatgaaact
gcttgtaagattggcactggattttctgaggaagacttggcgactctcagtacaaagctt
aaaccaacggaaatatcgcaaccgaaggctttctacacatacgacactactagctccaac
gcgctaccggacgtgtggtttgaaccgaccactgtcttcgaggttttgacggctgatctt
tcattaagtccagtgtataaagctgctcattccgaatacgggaagggaatttcgttacgc
tttccacgattcattagagtaagggatgacaagggagtcgaggacgctacaacttctacg
caagttgccgagttgtacgacaggcaagccaatataaattaa

DBGET integrated database retrieval system