Candida auris: CJI96_0003195
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Entry
CJI96_0003195 CDS
T04850
Name
(RefSeq) DNA ligase (ATP) DNL4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
caur
Candida auris
Pathway
caur03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CJI96_0003195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caur03400
]
CJI96_0003195
Enzymes [BR:
caur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CJI96_0003195
DNA repair and recombination proteins [BR:
caur03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
CJI96_0003195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
mRNA_cap_enzyme
DNA_ligase_A_C
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
40026069
NCBI-ProteinID:
XP_028893295
LinkDB
All DBs
Position
3:complement(1248546..1251446)
Genome browser
AA seq
966 aa
AA seq
DB search
MSVDTSFLDNVKEPKNFNNNAPFDLLVSDLFLKLESTTSENKAPFDTVSAKKTHIIEEFV
KTWRTHFGPNILPAVRLIFPNRDGRKYHVKDVALTRLVNKLLKLQPGSGDYQIIKNWKKS
YQQKANLANDSERRQLGDLPLIIARIISRRRDQTVPVKSSVTVAEVNDVLDQLAQKTQSK
EQLALLEPFVEKLTIPEVRYVFQMILKESMLSFFERAFFLAWHPDAYNLFKVCEDMKKIF
WVLSDPEKRLLPTQLCVQPMYMFVPQSSQKLNISYDSLCKRMTVALQTENKDKKLVDLYK
QEQIEGHFLIEEKIDGDRMLMHMVNGKFRWHTRRRRDYTLVYGENIHIGSLTKHLTDALD
DKVHSIVLDGEMVAWSKDREMILPFGTLRSAAIQEALKQFDVIDVYEGNNSWPLFLIFDI
LHLNGRDLTGLPLFYRKSLINKVVKEVPHRFEILEWVKAKSPTDIKANMQRIVSERNEGI
MVKSLLSKYRVYSRESTWIKVKPEYLESFGENLDLVVIGKIGRVKTSYICGLKDIEAEGC
YKSFCMVANGFSNAVYRQIESKLVNFWHDYTVEKPPATLIQFGTKKPDYWINPANSIVLE
IKARSIEVTAETPYAAGSTLHNLWCRAVREDKDYDECITLQEYQELKARYSTDIYKNQDV
NRNRKRPGENSIIEKYEKVKKLKIAAESDLLTGIHFVIATDYKDPDESKSMSAEALKQLV
RSHGGAIELNPKRNELHEKTVMVVGTNLTPRLQRWYKEGFDVISPRWIVESIRHEKLLPI
EPSFIVASVNAGFMNLAHQNVDEFGDSYVVTATSSQGLLQHLMSLTVKKRLADDSIERCR
RLFLEESDRESDPHWWMLFYGLKFHIVGSRSSITSHKAAAGSLSQRIARFGGECIGDVHQ
SHYIVVPEKVEKKHEVVAEVARVSRELRARYVEGKKIARVVRESFVVESVKEGVVVDAED
HNYSAD
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggacacgctgtttttggacaacgtgaaagagccgaaaaacttcaacaataat
gctccctttgaccttctagtgctggatctttttctcaagctcgagtccacaactctggaa
aacaaagcgccctttgacacagtcagcgccaaaaagacccatatcatcgaggaattcgtg
aaaacatggcgaactcactttggacccaacattctccctgcagtaagactcattttcccg
aacagggacgggcgcaagtaccacgtcaaggacgtagcgctcacgaggctcgtcaacaag
ttgttgaagcttcaaccggggctgggggactaccagatcatcaagaattggaaaaaactg
taccagcagaaagctaacttagccaatgactcggagagacggcaattgggcgaccttccg
ttaattattgctagaatcatcctgcgtcgaagagatcagactgtgccagtgaaaagttcg
gtgactgtggctgaggtgaacgacgtgttggaccaattggcccagaaaactcagtcaaag
gagcaattggcgctcttggagccgtttgtggagaaattgaccattcctgaggtgagatac
gtgtttcagatgatccttaaggagtcgatgctactgttttttgagagagctttctttcta
gcgtggcatccagacgcctacaatttgttcaaggtttgtgaggacatgaagaaaatcttt
tgggtgctctcagatccagagaagcggttgttgcctacacaattgtgtgtgcagcctatg
tacatgtttgttccccagagttcccagaagctaaacatctcctacgacagcttgtgcaag
aggatgacggtggcattgcagacagaaaacaaagacaagaagctcgtagatttgtataaa
caagagcaaatagaaggccactttcttatagaagagaagatcgacggcgatagaatgttg
atgcacatggtcaatgggaagtttcgttggcatacgcgccgccgaagggattacactttg
gtttatggcgagaacatccacatcgggtcgctcacgaaacacttgaccgatgcattggac
gacaaagtgcacagtatagtgctagatggcgaaatggtggcctggagcaaagacagagag
atgattttaccctttggtacgctacgatcagcagctatccaggaagccctcaagcagttt
gatgtgattgatgtgtacgaaggaaacaatagctggccgttgtttttgatctttgacatt
cttcatctcaatggaagagatctcacagggctcccattattctaccgaaaatcgcttatc
aacaaggtggtgaaggaagtaccccacagatttgaaattttggaatgggtcaaggccaaa
tcgcctactgatattaaggccaacatgcaacggatagtgagcgagaggaacgaagggatc
atggtgaagtcgcttctttcaaagtatagagtgtacagtcgagagctgacttggatcaag
gtcaagccggagtatcttgagagttttggtgagaacctcgaccttgtggtcattggcaag
atcggcagagtgaaaacgtcgtatatttgcggactcaaagacattgaggccgaaggctgc
tacaagctgttttgcatggtggccaatgggtttctgaatgcagtgtatcgccagatcgaa
agtaaattggtcaatttctggcatgattacaccgtggaaaagcctccagcgactctaata
cagtttgggacgaaaaagccagactactggattaacccggccaatctgattgtgcttgaa
ataaaggccaggtccatagaagtcacggcagaaacaccgtacgcggctgggtctactttg
cacaatttatggtgccgagcagtcagagaggacaaggactacgacgagtgtatcactttg
caagagtatcaggaactcaaggccaggtactctaccgacatttacaagaaccaggacgtc
aaccgcaaccggaaacggccaggagaaaacctgattatagaaaagtacgagaaggtgaag
aagttgaaaatagccgctgaactggatttgctcacgggcatccattttgtcattgctaca
gattacaaggatccggacgagctgaagagtatgagtgcagaggctttgaagcaattggtt
aggctgcacggaggagccattgagctcaatccaaagagaaacgagcttcatgaaaagacg
gtgatggtggttggaaccaatctcacgccccgattgcaacgctggtacaaagaaggattt
gatgtgattctgccccggtggattgttgaaagcattcgccacgaaaagctacttcccatc
gagcccagcttcattgtggctagtgtgaatgcagggttcatgaatttagcccaccagaat
gtcgacgagttcggcgacagctacgttgtcacagccaccagcagccaggggcttctccag
cacttgatgagtctcacagttaaaaagaggcttgctgatgacagtatcgagagatgtagg
agactcttcttggaggagagtgaccgagagctggatccccattggtggatgctcttttac
gggctcaagttccatattgtaggcagcaggagcagcatcaccagccacaaggcggccgca
ggcagcttgagccagagaatcgcccgctttggaggtgagtgcattggcgatgtgcatcag
agtcattatatagtggtgcctgagaaggtggagaaaaagcacgaggttgtggctgaggta
gcacgagtgagcagagaattgagggcacgatacgtggagggcaagaaaatcgctagggtt
gtgagagagtcttttgtcgtggaaagtgtcaaggaaggagtagtggtggacgctgaagat
cacaattactcggcggattga
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