Corynebacterium auriscanis: CAURIC_07390
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Entry
CAURIC_07390 CDS
T09334
Symbol
deaD1
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
caus
Corynebacterium auriscanis
Pathway
caus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAURIC_07390 (deaD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caus03019
]
CAURIC_07390 (deaD1)
03009 Ribosome biogenesis [BR:
caus03009
]
CAURIC_07390 (deaD1)
Enzymes [BR:
caus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CAURIC_07390 (deaD1)
Messenger RNA biogenesis [BR:
caus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CAURIC_07390 (deaD1)
Ribosome biogenesis [BR:
caus03009
]
Prokaryotic type
rRNA helicases
CAURIC_07390 (deaD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
adh_short
Motif
Other DBs
NCBI-ProteinID:
WJY73096
LinkDB
All DBs
Position
complement(1700946..1703237)
Genome browser
AA seq
763 aa
AA seq
DB search
MSDTENVTGDVQKPVTDESVSQKELREGADNSPLDVSDVLGIEPDATGEAVDSEKAENVQ
EQEQDVNSGQENHTEPVVEAAADDKEQVTEGPSFDNLGLTSEVLEAVKKVGFEAPSPIQE
QTIPVLMDGKDVVGLAQTGTGKTAAFALPILARIDPSKRHPQALVLAPTRELALQVAESF
ESFATHLGGIHVLPIYGGQAYGIQLSGLRRGAHIVVGTPGRVIDHLNKGSLDISELRFMV
LDEADEMLNMGFQEDVERILEDTPEDKQVALFSATMPAGIRRLSKQYLNNPQEITVKSTQ
RTSENIEQDYLFVNHRNKLDALTRILEVTEFEAMIMFVRTKNETEELAERLRARGFNAAA
INGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVDRITHVFNYDIPHDTESYVHRIG
RTGRAGRSGRAILFVTPRERRLLKAIERATKSTLNEIELPSVDAVNDARKDKFREALQDS
LGDTQLPVFRELVTEFAASTETPMEDIAAALAAQIQAGEDFLMKEMPKDERPARRRREDR
YGDEGRSGGGSYRSFNERFNKEAPRVTDRNGNEMAVYRLSVGHRQRVRPGAIVGAIANEG
GLNSRDFGRINIFSEHSLIELPADLPREVFEQLDKTRVSGQLINIEPDPGAPDGRPASHR
RGDGRGDRDRGGRGDRGSRGGRGDRFRGDDRRGDDRRGGRGDWNESRDRGFGGRGRGNRD
RDDFRGGDRRGHGERGDRGDRGGRGGFNRDDRGGRGDRFRGRR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatactgaaaacgtcaccggcgacgtgcaaaagccggttacggacgagtcggta
tctcagaaagaactgcgtgaaggggcggacaattcgcccctagatgtgtctgatgtgttg
ggaattgaacctgacgcgactggtgaggcagtggattctgagaaggccgagaacgtgcaa
gaacaagagcaagatgtaaattccggccaagagaaccacactgaaccagtggttgaagcg
gccgcagatgataaagaacaagtaactgagggcccgtccttcgacaacctggggctgacc
agtgaagtactggaagccgtgaagaaggttgggttcgaagcgccttcgccaattcaggaa
caaaccatccctgtcctgatggacggcaaagatgttgttggactggcacaaaccggtaca
ggtaagacggcggcttttgcgctgccaatcttggcccgtattgatccatccaagcgccac
ccgcaggctttggtgctagctcccacccgtgagctcgcgctgcaggtagccgaaagcttc
gagtccttcgctactcatctgggtggaatccatgttctgcccatttacggtggccaagcc
tacggcattcagctttccggcttgcgtcgcggtgcccacatcgtcgtgggaaccccgggg
cgtgtcattgaccacttgaataagggcagcttggatatctctgagctgcgattcatggtg
ctggatgaagccgatgaaatgctcaacatgggtttccaggaagatgtggagcgcatcctt
gaggacactccagaggacaagcaggttgcgttgttctccgccacgatgccagcgggtatt
cgtcggttgtccaagcagtacctgaacaacccgcaggaaatcacggtcaagtccactcag
cggaccagcgagaatatcgagcaggattacttgttcgtcaatcatcgtaacaagctggat
gccctgactcggattcttgaggtcaccgagttcgaggccatgatcatgttcgttcgcacc
aagaacgagactgaggagttggccgagcgcttgcgtgcccgcgggttcaacgctgctgcc
atcaacggcgacatcgcccaggcacagcgtgagcgcactgtcgatcagctgaaggacgga
cgtctggatatcctggtcgccacggacgtggctgcgcgtggtttggacgtggaccgcatt
actcacgtgttcaactacgatattcctcacgataccgagagctatgtgcaccgcattggc
cgtacgggacgtgccggtcgctccggtcgggcaattttgtttgtgacgccccgtgagcgg
cgcttgctgaaggctatcgagcgggccacgaagtccacgctgaacgagattgaactgcct
tccgttgacgcggtgaatgacgcacgcaaggacaagttccgtgaggcgctgcaggacagc
ttgggcgatactcaactgcctgtattccgcgagttggtgaccgaattcgcagcgtccact
gaaactccaatggaggacattgctgcggctctcgctgcacagatccaagccggcgaagat
ttcctgatgaaggaaatgccaaaggacgagcgcccagctcggcgtcgtcgcgaagatcgt
tacggcgatgaaggtcgctccggtggcggtagctaccgcagcttcaatgaacgctttaat
aaggaagctccgcgggttacggaccgcaacggcaacgagatggcggtgtaccgcttgtcc
gtgggtcatcgccagcgcgtgcgcccaggcgccatcgtaggtgcgattgccaacgagggt
ggtctgaactctcgcgattttggccgcatcaacattttctccgagcactctctcatcgag
cttccagcggacctaccacgcgaggtttttgagcagctggataaaacccgcgtatcgggc
cagttgatcaatattgagccggatccaggagcaccagacggtcgccccgccagccatcgt
cgcggtgatggccgtggcgatagggatcgcggtggtcgtggcgatcgtggtagtcgtggt
ggtcgtggtgatcgcttccgcggtgatgaccgacgcggtgatgatcgtcgtggcggccgt
ggggattggaacgaatctcgcgatcgcggctttggcggccgcggacggggtaaccgtgat
cgcgatgacttccgtggcggtgaccgccgcgggcacggcgaacgcggggatcgcggagat
cgcggaggccgtggcggtttcaaccgcgatgatcgcggtgggcgcggtgatcgcttccgc
ggacgccgctaa
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