Corylus avellana (European hazelnut): 132177611
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Entry
132177611 CDS
T09426
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132177611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132177611
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132177611
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
FapA
Motif
Other DBs
NCBI-GeneID:
132177611
NCBI-ProteinID:
XP_059445987
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All DBs
Position
ca1:complement(40847730..40855127)
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AA seq
778 aa
AA seq
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MSGFSFGSSSASSSSLSTPAFSLSNPPSSGLSFGSSAPPFGSATATSSSPFGFGSSTSTS
SSSPAPSFSFPFNSASTPAASLFGTAPSSSSATSAPSPFGTISSAAPTSGSSPFGSANSG
FSLFGTASSATTSVSAAAGSGSSLFGTTSSSAPKSSSLLFGTTSSSVAPTSGSPLFGTTP
SSATPTSGSPLFGTTSSSAAPTSGSPLFVTTSSVAAPTSGSPLFGTTSSVAAPTSGSSLF
GATSSSAAPTSGSTLFGTTSSSALPTSGSSLFGTTSSAAATSGFGSTLFGTTASSANTGL
SPFGASSSASPFSTSTTVFPSSSSSSLSSASTTPAFPFASSSAPSSTTTSPFSATAGISF
SNSSAFSKPTTPSAAVSSSSTTTTTTTTSSAFSFVPPSSSASQPSFGYTASSAAAAVSTT
PATKGSSLSFGTSTAPLFSTVTTTTASTPAATTTSSTTTAATQASFSLPAFGVSSSAATS
ASTAAAAASSAFSSGNVGAFTGFAFSKPSTPASSLQSHSTTAAPTFGVSSTSAAATTPSL
STTGAQTSSSLIVSSSSGTTSSVSTTVSTAPKLPSEITGKTVEEIIKEWNSELQERTGKF
RKQANAIAEWDRRILQNRDVLLRLEIEVAKVVETQTNLERQLELIETHQQEVDMALQSME
EEAERIYKDERGLLLDDEAASTRDAMYEQSEFIERELEQMTEQIKSIIQTLNSNQGGELD
AIDGMTPLDVVVRILNNQLSSLMWIDEKAGEFSSRIQKLASQGSTADRELMGPKLWRS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcttctcatttggatcttcatcggcttcttcttcttcactatccacgcccgca
ttctccctctcgaacccgccctcctccggattatcattcggatcctccgctcccccattc
ggatccgccaccgccacctcttcttccccattcgggttcggatcctccacttccacttcc
tcttcttctccagctccttccttctccttccccttcaattccgcttcgacccccgctgcc
tccttgttcggaactgcaccgtcttcgtcctctgcaacttccgctccctccccgtttggg
acaatctcatcagccgcgcccacctcaggttcgtccccattcggttcagctaattcaggg
ttttccttgttcgggaccgcctcatctgctactacttcggtctccgccgcggcaggttcc
ggttcgtccttgttcggaacgacgtcgtcctccgctcccaagtctagttccctcctgttc
ggaacgacgtcgtcctccgtggcaccaacctctggttcacctctgttcggaacgacgccg
tcctctgcgacgccaacttctggttcgcctctgttcggaacgacgtcgtcctccgcggct
ccaacttctggttcacctctattcgtaacgacgtcgtccgttgcggcgccaacttctggt
tcgcctctgtttggaacgacgtcgtctgttgcggcgccaacttctggttcttctctgttc
ggagcgacgtcgtcctccgcggctccaacttctggttcaactctattcggaacgacgtcg
tcctccgcgctaccaacctcaggttcctctctgttcggaacgacgtcgtccgctgcggcg
acttctggttttggttccaccctgtttggaacaacagcctcatcagcgaatacaggttta
tccccattcggagcttcatcatccgcttctccattttcaacttcgaccaccgtctttccc
tcttcttcttcttcttctttgtcttctgcttcaaccactcctgcattcccattcgcttca
agctcagctccaagttcaaccacaacctcgcctttctctgctaccgctgggatttcattc
tcaaattcttcagctttttcaaaacccacgacaccctccgctgctgtatcttcctcttca
actacaacaacgactacgacaacctcttctgccttctcattcgtcccaccctcttcctca
gcttctcagccttcatttgggtacacagcctcttcggccgccgctgctgtttccaccaca
cctgcaacaaagggttcttctctgtcctttggaacatctacggctccgttgttctcgacg
gtcaccaccacgactgcttccactccagctgctactactactagtagtactactaccgct
gctacacaagcttcattttctttgcccgcatttggtgtgagttcttcggctgcaactagt
gcttcaacagcagcagcagcagccagctccgccttttcttcgggcaatgtaggagctttt
acgggctttgcgtttagcaaaccgtcgacgcctgcttcgtccttgcaatcacattcgact
actgctgcgcctacttttggtgtctcttcaacttctgcagctgcaacaactcccagtttg
agcactactggtgcgcagacatcatcatctcttattgtgtcctccagtagtgggacaact
tcaagtgtcagcactacagtatctactgcaccaaaattaccgtctgagatcacagggaag
actgttgaagagatcatcaaggagtggaattctgaactacaagagcgtactggaaagttc
cgaaagcaggctaacgcgatagctgagtgggaccggagaattttgcagaatcgtgatgta
cttcttaggctcgagattgaagtggcaaaagtggttgagacccaaactaacttggagcgg
caactggagttaattgagactcatcaacaagaggttgatatggctttgcaaagtatggaa
gaagaagctgagcgtatttacaaggatgagcgtggattgcttcttgatgatgaagctgct
tccacaagagatgcaatgtacgagcagtctgaatttatagagagggaattagagcagatg
acagaacagatcaaatcaattattcagaccctaaattccaaccagggaggagaacttgat
gcaattgatgggatgacaccactagatgtagtagtccggattttaaacaatcaactaagt
tctttaatgtggattgatgagaaggcaggggaattttcttctcgcattcagaaactcgcc
agccaaggttcgaccgcagatcgtgaattgatgggtccaaagttgtggaggtcctaa
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