Corylus avellana (European hazelnut): 132183633
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Entry
132183633 CDS
T09426
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132183633
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cave01009
]
132183633
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132183633
03036 Chromosome and associated proteins [BR:
cave03036
]
132183633
Protein phosphatases and associated proteins [BR:
cave01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
132183633
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
132183633
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
132183633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ComGF
DX
Motif
Other DBs
NCBI-GeneID:
132183633
NCBI-ProteinID:
XP_059452977
LinkDB
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Position
ca6:8411627..8423749
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AA seq
516 aa
AA seq
DB search
MIGGDEATKAPAAGAPQPLEWNFSQVFGERAAGEEVQEVDIISAIEFDRTGDHLATGDRG
GRVVLFERNDTKDHYGHRRDLERTDYLISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN
KIRWCHAANGALFLLSTNDKTIKFWKVQEKKVKKVCDLNVDHSRAMGNGPVVCSRKSASS
KQCMENGGCNERPSGYSSIDASLPSGGVPPLRLPVVVTTHETSPVAKCRRIYAHAHDYHI
NSISNNSDGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCN
TIAYSSSRGSIRLIDMRQSALCDTHSKLFEEQEVPGSRSFFTEIIASISDIKFAKDGRYI
LSRDYMTLKLWDINMDRGPVTTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGRHVATG
SYSNLFRVFGCSEGSTEATTLEASKNPTRRQVQTPTRPSKPPGTLPRVLRRGADTSGADA
NGSAFDFSTKLLHLAWHPTENSVACAASNSLYMYYA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcggagacgaggcaacgaaggcgccggcggcgggggcgccgcagccgctggag
tggaatttctctcaggtattcggcgaacgggcggctggggaagaagttcaggaagtcgat
atcatttctgctattgaatttgatagaactggggaccacttagctactggagatcgtgga
ggtcgggtggttttatttgaaagaaatgatacaaaggatcattatggacatcgaagagat
ctagagaggacagattatttaatcagtaggcatcctgagttccgttataaaactgagttt
cagagccatgaacctgagtttgactatcttaagagcttggaaattgaggagaaaattaac
aagattagatggtgccacgcagctaatggtgccctgtttcttctctctaccaacgataaa
actatcaaattttggaaggtccaagagaagaaggtaaagaaagtatgtgacttgaatgtg
gatcattcaagagctatgggaaatggtccagttgtttgttcacgtaaatcagcaagctcc
aaacagtgcatggagaatggaggatgtaatgaaagaccctctggttattcgagcattgat
gcttcacttccatctgggggtgtcccgcccttacgtctgcctgtggtagtgaccactcat
gagacaagccctgtggctaagtgtcgaagaatctatgctcatgcacatgactatcatatc
aattctatttcgaataacagtgatggtgaaacttttatctccgcggatgatctgcgaata
aatctttggaacttagaaattagcagtcaaagtttcaatattgttgacgtgaagcctgca
aacatggaggatctcactgaggtgataacatcagcagagtttcaccctactcattgtaat
acgatagcatacagtagctcaaggggttcgatccgtcttattgacatgcgacagtcagct
ttgtgcgatactcatagcaaattgtttgaggagcaggaagtgcctggttcaaggtctttt
ttcactgagataatagcctcaatttcagatattaagtttgctaaagatggaagatatata
cttagtcgagactacatgactcttaagctatgggacataaatatggatcgtggcccagtt
acaacttttcaggttcatgaatatttaagacctaagctgtgtgatttatatgaaaatgat
tcaatcttcgacaaatttgagtgctgtctaagtggagatggacgtcatgtggcaacaggt
tcctacagcaatctattccgtgtgtttggttgttctgaaggcagcacagaagcaacaaca
ttggaagccagcaaaaaccctacgaggagacaagtccaaacaccaacaaggccttctaaa
cctccgggcacccttccccgtgtcctcaggcgaggagctgatacctctggggcggatgct
aatggaagtgcttttgatttctccacaaagttgctacacctagcatggcatccaactgag
aactcagttgcctgtgctgcttcaaatagcctctacatgtattatgcgtaa
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