Corylus avellana (European hazelnut): 132188289
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Entry
132188289 CDS
T09426
Name
(RefSeq) ABC transporter B family member 20 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132188289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cave02000
]
132188289
04147 Exosome [BR:
cave04147
]
132188289
04090 CD molecules [BR:
cave04090
]
132188289
Enzymes [BR:
cave01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
132188289
Transporters [BR:
cave02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
132188289
Exosome [BR:
cave04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132188289
CD molecules [BR:
cave04090
]
Proteins
132188289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
Zeta_toxin
AAA_16
Motif
Other DBs
NCBI-GeneID:
132188289
NCBI-ProteinID:
XP_059458691
LinkDB
All DBs
Position
ca7:26922483..26935348
Genome browser
AA seq
1399 aa
AA seq
DB search
MMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYMDQSAETAGQQVEPEEVMEEMEEIEP
PPAAVPFSRLFACADRLDWALMIVGSFAAAAHGTALVVYLHYFAKIVHVLKIDPEKHDEQ
FERFRELTLTLVYIAVGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYG
NNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVLGFINCWQIALITLATGPFIV
AAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLR
YGILISLVQGLGLGFTYGLAICSCALQLWVGRFLIGSKKAHGGEIITALFAIILSGLGLN
QAATNFYSFDQGRIAAYRLFEMISRSSSAVNQDGTTPVSVQGTIEFRNVYFSYLSRPEIP
ILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRS
QIGLVTQEPALLSLSIRDNIAYGRDATFDQIEEAAKIAHAHTLISSLERGYDTQVGRAGL
ALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRL
SLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLKCEEAAKLPRRMPLRNYKEIAAF
QIEKDSSASYSFQEPSSPKMVKSPSLQRVPGIFRPSDSTFNFQESPRAGSPPPEKMLENG
QPLDAADKEPSIRRQDSFEMRLPELPKIDVQSAHRQTSNGSDPESPVSPLLTSDPKNERS
HSQTFSRPHSQSDDVPVKVKEAKNTQHREAPSFWRLAELSLAEWLYAVLGSTGAAIFGSF
NPLLAYVIALIVTAYYKHEGHHLREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMT
ERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIV
AVLIGMLLQWRLALVALATLPILTVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIY
TVVAFCAGNKVMELYRLQLNKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAYSVK
HKYMDLPTAVKEYMVFSFATFALVEPFGLAPYILKRRKSLTSVFEIIDRVPKIEPDDNSA
LKPPNVYGSIELKNVDFCYPTRPELLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLMER
FYNPVSGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKE
AARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIE
SESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGL
YVRLMQPHFGKGLRQHRLV
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgatggtctcgagggggctattcgggtggtccccaccgcacatacagccgttgacgcct
gtgtcggaggtgtcagagccgccggagtctccgtcgccgtacatggaccagagcgcagag
actgcggggcagcaggtggagccggaggaggtgatggaggagatggaggagatcgagccg
ccgcctgcagctgtgccgttctcgcgcctcttcgcttgcgccgaccgccttgactgggct
cttatgatcgtcggctcgttcgccgctgccgcccacggcaccgctcttgtcgtctacctt
cattacttcgccaagatcgtccacgtcctcaagatcgaccccgaaaagcacgacgagcag
ttcgagaggtttcgggagcttactttaacactcgtgtatattgctgtgggcgtttttgct
gctggttggattgaggtttcttgctggattctgactggggagaggcagactgctgtcatc
aggtcaagatatgttcaagtattacttaaccaggacatgagtttttttgatacctatggg
aacaatggggacattgtgagccaagtattgagtgatgtgctacttattcaatcggctctt
agtgaaaaagttggaaattatatccataatatggctacatttttcagtggtcttgttctt
ggatttatcaactgttggcagatcgcactcataacactagccaccggtccattcattgta
gctgctggaggaatatcaaatatatttcttcacaggcttgccgagaatattcaagatgca
tatgctgaagcggctagcattgctgaacaggcagtctcctatattaggacattgtatgca
tttacaaatgaaacattggccaagtattcttatgcaacatcactacaagcaactctgaga
tatggtatattaataagccttgtgcaaggccttggtcttggatttacgtatgggcttgct
atatgttcttgtgccttacaactgtgggtgggaaggtttctaattggaagcaaaaaagct
catggtggtgaaattataacagccctatttgctataattttaagcggccttggactgaat
caagccgcaacaaacttctattcatttgaccaaggacgaattgctgcttatagacttttt
gagatgataagccgatcatcctctgcagttaatcaagatggaactaccccagtttcagta
caaggaactatcgagtttaggaatgtatatttcagctatttgtctcgtcctgaaatccct
attttgagtgggttttacctcactgtacctgctaagaaagctgtggcacttgttggcaga
aatggctctggtaagagcagcattatcccactcatggagcggttttatgatcctacatta
ggagaagttctcttggatggagaaaatattaagaacctgaaactggaatggctaagaagc
caaataggactagttacccaggagcctgccttgctaagtttgagtataagagacaatatt
gcttatgggcgggatgctacctttgatcaaattgaagaagctgctaaaatagcacatgca
catactttaatcagctcacttgagagaggatatgacacacaggtgggtagggctgggtta
gcattaacagaagagcagaaaataaaactttctattgctagagcggtacttttaaatcca
tcaattcttctgcttgatgaggttactggcggacttgattttgaagctgaaagagctgtt
caggaggctctagatctcctcatgttaggacgctcaactataataatagctcgacgactt
agtcttatcaggaatgctgattacatagctgtgatggaggagggtcaacttgttgaaatg
ggtacacatgatgaattattgaccctggacggcctatatgcagagcttctcaaatgtgaa
gaagcagcaaaacttcctagaaggatgccattaagaaactacaaagagattgcagctttc
caaattgaaaaggattcttcagcaagttacagcttccaagaaccatcatctcctaaaatg
gtcaaatcgccctctctccagagagttcctggcatattccgaccatcagatagcaccttt
aactttcaggaatcacccagagctgggagcccaccaccagagaagatgctggaaaatggt
cagcccttggatgcagcagataaggaaccatcgataagaaggcaggatagttttgaaatg
agactaccggagttgcccaagattgatgttcagtctgcacatcgacaaacatcaaatggt
tccgaccctgaatctcctgtttcaccccttttgacatctgatcccaagaatgaacgttca
cattcacagacttttagtcgaccacatagtcagtctgacgatgttccagtgaaagtgaag
gaagcgaaaaatacacagcatcgggaagcaccatcattttggaggttggcagagcttagt
ttggcagagtggctttatgctgtattaggaagcaccggtgctgctatctttggttctttt
aatcctcttcttgcttatgttatagcacttatagtaacggcatactataaacatgaaggc
catcacttgcgggaggaagtagacaaatggtgcttgatcattgcctgcatgggtatagtg
acagttgttgccaattttttgcagcacttctactttggtataatgggggagaagatgact
gaacgagttcgtagaatgatgttctcagcgatgttgcgcaatgaagttggatggttcgat
gaagaggaaaacagtgctgacaccttatccatgcgtttggcaaatgatgctacatttgtg
cgagctgcttttagcaaccggctctccatatttatacaggacagtgctgctgttattgtg
gctgttctcattgggatgttgctacaatggcgattggcacttgtggctttggcgaccctg
ccgattctcactgtttctgccattgctcagaaattgtggcttgctggattttcaagggga
atccaggagatgcacaggaaggcatctttggtccttgaggatgcagttagaaacatatac
actgttgtagcattctgtgctggtaacaaggtaatggagctctacagattgcaactaaac
aaaatatttaaacagagtttccttcacggaatggccattggttttgcatttggcttctca
cagtttttactttttgcctgtaatgcccttctcctctggtacaccgcatattctgtaaaa
cataaatatatggatctacctactgctgtcaaggagtatatggttttctcttttgcaaca
tttgcactggtggagccttttggattggctccttacatacttaagcgtcgtaagtctctc
acttcagtatttgaaatcatagatcgagtgcctaagattgaaccagatgataactcagca
ttgaagccaccgaatgtatatgggagcatcgagttgaaaaatgttgatttctgttaccct
actcgcccagaattgttggtattgagcaacttcagtctcaaagtcaacgggggacaaact
gtggctgtggtgggagtttcagggtctgggaagagcaccataatatctttgatggagaga
ttctataatccggtttctggtcaagtactactggatgggcgagatttgaaactttataat
ttgagatggttgaggaaccacctaggtcttgttcagcaggaaccaattatcttctcaaca
accataagggaaaacataatatatgcaaggcacaatgctagtgaagctgaaatgaaagag
gctgctaggatagcaaatgctcaccatttcatcagcagcttgcctcatggttatgacaca
catgtgggaatgaggggtgtggatctcaccccaggacagaaacagagaattgcaattgct
cgggtagtgctaaaaaacgcacccatattgttattagatgaagcaagctcgtccattgag
tctgagtcaagtcgagtggtgcaggaggctctagatacattgatcatggggaacaaaaca
accattctgatagcccatagagctgcaatgatgaggcatgtagacaacattgtagttctg
aatggggggcgaattgtagaggaagggacccatgattctttggtggcaaagaatggtctg
tatgtccgtttgatgcaacctcatttcgggaagggtttgcgtcagcatcgacttgtttag
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integrated database retrieval system
