KEGG   Corynebacterium atypicum: CATYP_03920
Entry
CATYP_03920       CDS       T03227                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cax  Corynebacterium atypicum
Pathway
cax02024  Quorum sensing
cax03060  Protein export
cax03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cax00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CATYP_03920
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CATYP_03920
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CATYP_03920
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cax02044]
    CATYP_03920
Enzymes [BR:cax01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CATYP_03920
Secretion system [BR:cax02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CATYP_03920
  Eukaryotic Sec-SRP protein
   CATYP_03920
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_16 nSTAND3 APS_kinase cobW Zeta_toxin MeaB AAA_22 6PF2K NTPase_1 AAA_18 TsaE AAA_33 AAA_30 AAA NACHT MobB AAA_28 Thymidylate_kin ArsA_ATPase AAA_25 AAA_24 AAA_31
Other DBs
NCBI-ProteinID: AIG63940
LinkDB
Position
837368..838984
AA seq 538 aa
MFESLSDRLSGALKGIRGKGKLTEADINATAREIRLALLEADVSLTVVRAFIKRVKERAL
GAEVSQALNPAQQVIKIVNDELTAILGGEARRITLAKRPPTVIMLAGLQGAGKTTLAGKL
ARYLAKQGHTPMLAACDLQRPGAVQQLQIVGERAGVPIFAPEPGASIDSADDSGEGTRSF
GDPVAVARAAVEEARRAQHDVVIVDTAGRLGIDQTLMDQARSIRDAINPDEVFFVIDAMI
GQDAVTTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGKPVMFASTGEKLEDFDVF
HPERMASRILGMGDVLTLIEQAEGMVDESTAQETAKKIGSGELTLEDFLDMMLMVRRMGP
MGNLLKMLPGKEMAQMADMVDEKQLDRIQAIIRGMTPAERANPKILNASRRKRIAQGSGV
KVSAINQLVERFNQAKKMMGKMGGAFGLGGSKRSATKKKPKGRKNKKGKRKGAVQRGGQA
PGMGMPDMNELKKLQEQMGNSGGMPGFGGMGAPKLPKGMENIDLSNLDFGQAGKRGRR
NT seq 1617 nt   +upstreamnt  +downstreamnt
gtgtttgagtcactgtccgatcggctctccggagcgctcaaaggcatccggggcaagggg
aaactaaccgaggcggacatcaacgccaccgcgcgtgaaatccgtcttgcgctgctggag
gccgacgtctcgcttacggtagtgcgggcctttatcaagcgggtgaaggagcgcgcccta
ggcgcggaggtctcccaggcgctcaaccccgcccagcaggtgatcaagatcgttaacgac
gagctcaccgccatcttgggcggcgaggcccgccggatcacgctggccaagcgcccgcct
acagttatcatgctggccggcttgcagggcgccggtaaaaccacgctggccggaaagttg
gcgcggtatctggccaagcagggccacaccccgatgctcgcggcgtgcgacttgcagcgc
ccgggagcggtgcagcagctgcagatcgtcggcgagcgcgccggggttcccatattcgcc
ccggagccgggcgcctcgatcgattcggccgacgattcgggcgagggtacgcgctcgttc
ggtgacccggtcgccgttgcccgcgccgctgtggaagaggctcggcgagcccagcacgac
gtggtgatcgtcgatacagccggccgcctcggcatcgaccagacgttgatggaccaggca
cgcagcatccgcgacgcgatcaacccggacgaggtcttcttcgtcatcgacgcgatgatc
ggccaggacgcggtgaccacggcggaggcgttccgcgacggcgtggactttaccggtgtg
gtgctcaccaagctcgacggcgacgcccgcggcggcgcggcgctgtccatccgcgaggtg
accggcaaaccggtcatgttcgcatctaccggcgagaagctcgaggacttcgacgtcttc
cacccggagcggatggcgagccgtattctgggcatgggcgacgtgctcacgctgatcgag
caggccgagggcatggtggacgagtccaccgcccaggagaccgccaagaagatcggctcg
ggggagctcaccctcgaggacttcttggacatgatgctcatggtccggcgcatggggccg
atgggcaacctgctcaagatgctgccgggcaaagagatggcccagatggcggacatggtc
gatgagaagcagctcgaccggatccaggcgatcatccgcggtatgacgcccgccgagcgc
gccaacccgaagatcctcaacgcctcgcggcgcaagcgcatcgcccagggatccggcgtc
aaggtctctgccatcaaccaactggtcgagcggttcaaccaggcgaagaagatgatgggc
aagatgggcggagccttcggcctgggcggctcgaagcgcagcgccaccaagaaaaagccc
aagggccggaagaacaagaagggcaagcgcaagggcgcagtccagcgaggtggccaggcg
ccaggcatgggcatgcccgacatgaacgagttgaagaagctccaggagcagatgggcaac
tccggcggcatgcccggatttggcggcatgggcgccccgaagctaccgaaggggatggaa
aacatcgacctgagcaatctggactttgggcaggccggcaagcgcggtcgccgatag

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