Corynebacterium argentoratense: CARG_03810
Help
Entry
CARG_03810 CDS
T02821
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
caz
Corynebacterium argentoratense
Pathway
caz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CARG_03810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caz03019
]
CARG_03810
03009 Ribosome biogenesis [BR:
caz03009
]
CARG_03810
Enzymes [BR:
caz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CARG_03810
Messenger RNA biogenesis [BR:
caz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CARG_03810
Ribosome biogenesis [BR:
caz03009
]
Prokaryotic type
rRNA helicases
CARG_03810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
adh_short
DUF3420
Motif
Other DBs
NCBI-GeneID:
16729548
NCBI-ProteinID:
AGU14910
UniProt:
U3GTV4
LinkDB
All DBs
Position
750839..752881
Genome browser
AA seq
680 aa
AA seq
DB search
MSNTDNVTSGVEELENVNLSEVEDHSQDVQEDVREAKESEATGPINGFESLGLPANVLAA
VKKVGFETPSPIQAQTIPVLMEGHDVVGLAQTGTGKTAAFALPILSRIDLDMRKPQALVL
APTRELALQVADSFQSFASSLGGIHVLPIYGGQAYGIQLSGLRRGAQIIVGTPGRVIDHL
EKGSLDISDLRFLVLDEADEMLNMGFQEDVERILADTPEDKQVALFSATMPNGIRRIARE
YLREPKEISVKSETRTNTNITQRYLSVAHRNKLDALTRILEVTEFEAMIMFVRTKHETEE
LAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVERISHVLNY
DIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERATNAPLNEMDLPTVDEVN
ESRKRKFADSITNALEHAEVAVFRKLVKEYSEEHDVPLEDIAAALATEASSGDEFFMKEL
PPSKRDRFDRDNRGDRGDRGGRRDRFDREAPTRFDRSGKEMAVYRLAVGKRQHVRPGAIV
GALANEGGLSSKDFGRINIAVDHTLVELPKDLPKEVFEALEDTRISGQLINIEPDPGAPM
GRPAAHRSRGDRDDRGGRGGFRGRDDRRDDRGGRGGFRGRDDRRDDRDDRGGRGGFRGRD
DRRDDRGGRGGFRSRNNDRY
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataccgataacgtcaccagcggcgttgaagagctggaaaacgtgaacttgtcg
gaagtggaagatcattcgcaggacgtccaagaagacgtcagggaagcgaaagaatctgag
gctaccggcccgattaatggttttgaaagccttggactccctgcgaacgtgctcgcagca
gtcaagaaggtgggcttcgagaccccgtcccccattcaagcgcagaccatcccggtgctg
atggaaggccacgacgttgtgggcctcgcacagaccggtactggtaagaccgctgcattc
gcactgccaatcctttcccggattgacctggacatgcgtaaaccccaggctttggtcctg
gcccccacccgtgagctagcactacaggttgcagacagcttccaatccttcgcctccagc
cttggtggcatccacgtgctgccgatctacggtggccaggcctacggcattcagctgtcc
ggccttcgccgcggtgcgcagatcatcgtcggcaccccgggtcgtgtcatcgaccacctc
gaaaagggttccttggacatctcggatcttcgcttcctcgtgttggacgaagcagacgag
atgctcaacatgggcttccaagaagacgtcgagcgtattctcgccgacaccccggaagac
aagcaggttgcactgttttccgccacaatgcccaacggcattcgcaggatcgcccgcgag
tatctgcgtgagccgaaggaaatctcggtcaagtccgagacccgtaccaataccaatatc
acccagcgttacctgtcggtcgcgcaccgcaacaagctcgacgccttgacccgcattctt
gaggtcactgagtttgaggccatgatcatgttcgtgcgcaccaagcacgaaactgaagaa
ctcgctgaaaagctccgtgcacgcggattctctgctgcagctatcaacggtgacatcgcg
caggcacagcgcgagcgcacggtcgaccagcttaaggacggccgtctcgacattctggtc
gcaacagatgttgctgcccgtggtcttgacgttgagcggatcagccacgtgctgaactat
gacattccgaatgacaccgaaagctatgtccaccgcatcggccgtactggtcgtgctggg
cgctccggcgaagctattttgtttgtcactccccgcgagcgtcgcatgctccgttccatt
gagcgcgccaccaatgcgcccttgaatgagatggatctgccgaccgtcgatgaggtcaac
gaatcccgcaagaggaagttcgcggattccatcaccaatgcgcttgagcacgctgaggtc
gctgtgttccgcaagctggtcaaggagtactcggaagagcacgatgttccccttgaggac
attgctgccgctttggccaccgaggcctcgtccggcgatgagttcttcatgaaggaactt
cccccgagcaagcgcgatcgcttcgatcgtgacaaccgcggcgaccgtggtgatcgtggc
ggccgtcgtgatcgcttcgaccgcgaagcccccacgcgtttcgatcgcagtggtaaagag
atggccgtataccgcttggcagtgggcaagcgccagcacgtgcgccccggtgctatcgtc
ggcgctcttgctaacgaaggtggtttgagcagcaaggacttcggccgaatcaacatcgct
gttgatcacaccctggtcgagcttcccaaggaccttccgaaggaagtgttcgaggcactc
gaagacactcgtatttccggtcagctgatcaacattgagccagatcccggcgcgcccatg
gggcgtcctgcagcgcatcgctcccgtggggaccgcgatgatcgtggcggccgcggtggt
ttccgtgggcgtgatgatcgtcgtgatgatcgcggtggccgcggtggtttccgtgggcgt
gatgatcgtcgtgacgatcgggatgatcgtggtggccgtggtggtttccgtgggcgtgat
gatcgtcgtgacgatcgcggtggccgtggcggcttccgctcacgcaacaacgatcgctat
tag
DBGET
integrated database retrieval system
