Serpentinimonas raichei: SRAA_0956
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Entry
SRAA_0956 CDS
T03614
Name
(GenBank) DNA polymerase III, gamma/tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa03030
DNA replication
cbaa03430
Mismatch repair
cbaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SRAA_0956
03430 Mismatch repair
SRAA_0956
03440 Homologous recombination
SRAA_0956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbaa03032
]
SRAA_0956
03400 DNA repair and recombination proteins [BR:
cbaa03400
]
SRAA_0956
Enzymes [BR:
cbaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SRAA_0956
DNA replication proteins [BR:
cbaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SRAA_0956
DNA repair and recombination proteins [BR:
cbaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SRAA_0956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_14
AAA_16
Rad17
AAA_19
AAA_5
TsaE
SKI
nSTAND3
AAA_2
T2SSE
Herpes_Helicase
PriC
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BAO80810
UniProt:
A0A060NIP3
LinkDB
All DBs
Position
1004477..1006240
Genome browser
AA seq
587 aa
AA seq
DB search
MSYLVLARKYRPQNFAQMVGQEHVVQALGNALRSQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCTGPDGAGGITAEPCGVCAACREIDAGRFVDYTELDAASNRGVDEVQALLEQAVYKP
VQGRFKVFMIDEVHMLTGHAFNAMLKTLEEPPAYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMPPQTVQQHLEQVLQAEQVPFEAGALRLLARGARGSMRDALSLTDQAIAFGAGQVFEA
PVRQMLGAVERGHVLHLLEALAAGDGAGVVQTVQQLRLQGYAAASALEEMVGLLQRMAVL
QAVPAQLQPHDPEDADCARLAGLLPPDLMQLLYSLCLHGRAELGLAPDEYAALNMVLLRL
LAFWPEGVEKKSLKTAESVRLGVAVAVAESAPAPAPRPLPMAVAEPSPPFQASNRVPAPS
KAVSDEPIFQPTPEHAAPEPASSEPAPEPIPKPAPQASTDQTLPDFWQTVVNDLLQREAV
TALTRELALQSVLVRREADCWTLRVGQSALAQGSARERLQAALAQAGYAVRLELEIAAAQ
DTPAQRAAAAAQARLQAAHAYLQQDPFVQAMQRDFGGKILPGSVQAL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacctcgttttggcccgcaagtaccggccgcagaactttgcccagatggtcggc
caggagcacgtggtgcaggccttgggcaacgccttgcgcagccagcggctgcaccacgcc
tacctgttcaccggcacgcgcggggtgggcaagaccacggtgtcgcgcattctggccaag
tcgctcaactgcaccgggcccgatggggcgggtggcatcacggccgagccttgtggcgtc
tgcgcggcctgccgcgagatcgacgccgggcgcttcgtcgattacaccgagctcgacgcc
gcctccaaccgcggggtggatgaggtgcaggcgctgctggagcaggcggtctacaagccg
gtgcaggggcgcttcaaggtgttcatgatcgacgaggtgcacatgctcaccgggcacgcc
ttcaacgccatgctcaaaacgctggaggagccgcccgcctatctcaagtttgtgctcgcc
accaccgacccgcaaaaagtgccggtgacggtgctcagccgctgcctgcagttcaacctg
cgccccatgccgccgcagacggtgcagcagcacttggagcaggtgttgcaggccgagcag
gtgccgttcgaggccggggcgctgcggctgctggcgcgtggcgcgcgcggctccatgcgc
gatgcgctcagcctgaccgaccaagccattgcttttggggccggccaggtgtttgaggcc
cccgtgcgccagatgctgggcgcagtcgagcgcggccacgtgctgcacctgctggaggcg
ctggcggcaggcgacggcgcgggcgtggtgcagacggtgcagcaattgcgcctgcaaggc
tacgctgccgcatcggcgctggaagagatggtgggcctgctgcagcgcatggcggtgctg
caggcggtgccggcgcagttgcagccgcacgacccagaagacgccgactgcgcccgcttg
gcgggcttgctgccaccggacctgatgcaactgctttacagcctgtgcctgcacgggcgt
gccgaactcgggttggccccggatgagtatgcggcgctcaatatggtgctgctgcggctg
ctggctttttggcccgaaggggtggaaaaaaaaagcctgaaaacggctgagtcggtgcgg
cttggggtggcggtggcggtggcggagtctgcaccggcacctgcacccaggccgctgcca
atggcagtggccgagccgtcaccgccgtttcaggcatccaatcgcgtgcctgcgcccagc
aaggccgtgagcgacgagccgatttttcagcctacccctgagcacgcggcccctgagccc
gcatcctcagagcccgctcccgaacctattcccaagccagcgccgcaagccagcaccgat
cagacgctgcccgatttctggcaaaccgtggtaaatgacttgctgcaacgcgaggccgtg
acggcactcacgcgcgagctggccttgcagtcggtgctggtgcggcgcgaggccgattgc
tggacgctgcgcgtgggccagtccgccctggcccaaggcagcgcgcgcgagcgcttgcaa
gctgcgctggcacaggctggttacgcggtgcggctggagctggaaatcgccgccgcccaa
gacaccccagcccagcgcgccgccgccgccgcgcaggcgcgtttgcaagctgcgcacgcg
tacttgcagcaagaccccttcgtgcaagccatgcagcgcgattttggcggcaaaatcctg
cccggcagcgtgcaggcgctgtga
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