Chitinophaga caeni: COR50_02165
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Entry
COR50_02165 CDS
T05360
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cbae
Chitinophaga caeni
Pathway
cbae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
COR50_02165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbae03021
]
COR50_02165
Transcription machinery [BR:
cbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COR50_02165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
GerE
Sigma70_ECF
Sigma70_r4
HTH_24
HTH_23
HTH_38
HTH_40
Pneumo_M2
HTH_11
Terminase_5
HTH_AsnC-type
HTH_30
DUF6650
HTH_36
HTH_Tnp_ISL3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ATL46062
UniProt:
A0A291QQA8
LinkDB
All DBs
Position
535178..535774
Genome browser
AA seq
198 aa
AA seq
DB search
MLLILQHLPSMTVTEDIALLSLVKDGHHDAFKVLYDRYAGALIQFAYSKTGDTEDAKDAV
QEVFIWLWQHKNQLQFNHNQLSIEAYLKTAVKNKILNLIDKKLRQQNYSDAAMQQFLSEI
PSDHSVNAKELQAIIQLEINAMPAKMREIFELSRDNGYSNKQIAGKLDLSEQTVKNQLQH
AKQRLKLKLSHYLASSLF
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgctgttaattttacagcatctacctagcatgacagtaactgaagatatagcactcctc
tccctggtcaaggatggtcaccatgatgcatttaaagtattatatgatcgctatgccggt
gcattgatccaatttgcatattccaaaaccggggatacagaagatgctaaggatgcggta
caggaagtgtttatttggttatggcaacataagaatcaattacaattcaatcataaccaa
ttatcaattgaggcttatttaaaaaccgctgttaaaaataaaatcctcaacctcatcgat
aaaaagctccgccaacaaaattattctgacgcagctatgcagcaattcctctcggaaatc
cctagcgatcatagcgtaaatgccaaggaattacaagcgatcatacagctagaaatcaat
gcaatgcctgccaagatgcgcgaaatatttgagctcagccgcgacaatggctatagcaac
aaacagattgccggtaagctcgatctctccgaacaaacggtcaaaaatcaactacagcat
gccaagcaaagattaaaattgaagttatcccattacttggcgtccagcttattttaa
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