Chitinophaga caeni: COR50_04840
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Entry
COR50_04840 CDS
T05360
Name
(GenBank) helicase SNF2
Organism
cbae
Chitinophaga caeni
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
SWIM
Motif
Other DBs
NCBI-ProteinID:
ATL46558
UniProt:
A0A291QRD6
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Position
1153469..1157194
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AA seq
1241 aa
AA seq
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MSLPHLLKYIYNNGTDEVIRRGKRIFASGGVELIEADPVLKSASFRVKSDTHANYYRVSV
NKYHDSSAISVRCQCPYNLGEICRHEAAALFQLQEMLDKNHFENFDSQYDQQHTVIKMRT
IDLKTIKLLTSSNIFADAEKLLRKYHPTIVSAKDEKVEAMLELPNETYQLIIQKNEERNF
DTHCQCDEHEFALCVHKTALFLHLLNQYGPYYFDSLRNWDKEKNKLLSLYGYSLEDNLDG
KFAFSYNNGKPFLRVLDPSIKKVESAMPSPKEEPPTQTIAPSKRIGVVLNANETLYPYFS
VDLITGEANEEGDAFVTLISKLDLTKYIDYYQFKEQDREVIAPTRKLQQSEINKFLNKNS
PFAGIWDNIIHESGDSLPTDTKELILEYLHPKLVKYFNQLSEQPLVFILKERQAFKTKSL
LPVNITGELLQISLHTKVEGDQVIITASVQIEDEEVNLADNEWSSPMVFIHNSDAYLFKI
PFDALQAELYQNQGNVKVPLSGWGQYLNENLLPLGKDYPISFDPALMAEVSGEIPEYRVQ
LKEIGDTFVIQPTFNYRGHDVEWNNETQITIQEDNKVLVIHRNKEAEEEFIQKLRGLHTS
FAAPTNFNYFYLRSKEALVNNWFFNFFDTLKEMNVRVFGFDNLRNFRFNTHKPVTNLQVS
SGIDWFDAQVEVVYGDQKVSIKDIKKALANKQNYVQLADGTLGLLPEEWLKKYSLLFKIG
EEKDKGGLKLSKYNFNVIDELYEFIDDEQVLRELDEKRTKLVQFDEIRHQPLPGNVNASL
RPYQESGFQWLNYLDEVKWGGILADDMGLGKTIQTLTFIQHYKNKHGRCLTLVVCPTTLI
YNWENEIKKFTPTIVHHIHHGPARIKSPEALRPFDVIITTYGTLRSDIQMFMKLEFDYVI
LDESQAIKNPQSKVTKAAQLLHTKNRLALSGTPMQNNTFDIYAQMNFLNPGMLGSIDFFR
NEFATPIDKFQDEERKDHLRKLIYPFILRRTKEQVAKDLPEKIETVIFCEMDHEQRQIYD
AYRNTYRSKILGVIEEQGMERSQLTILQGLMKLRQICDSPAILNETEQYPNHSVKLHELT
REMSENISNHKVLVFSQFLGMLGLIKEKLIAQKIPFEYFDGSTSTTERERAIQNFQQNSE
CRVFLISLKAGGVGLNLTAADYVYIVDPWWNPAVEQQAIDRTHRIGQTKNIFAYRMICKD
TVEEKILELQERKKSLVKEIVADENGFVKKLTKEDVMYLFS
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccccatctgttaaaatacatatacaataacgggaccgacgaggtgatccgt
aggggtaagcgcatatttgcatccggtggcgtagaactaattgaagcagatcctgttctg
aaatcagcctccttccgtgtaaaaagcgatacccatgctaactattaccgggtttcagtg
aataaatatcacgattcctcggctattagcgtgcgttgccaatgcccgtataacttagga
gaaatttgtcggcacgaagccgcagccttgtttcaactgcaagaaatgctcgacaaaaac
cattttgagaacttcgattctcaatatgatcaacagcatacggtaatcaagatgcgtaca
atcgacttgaaaaccattaagttgttgacttccagcaatatttttgccgatgcggaaaag
ctattgcggaagtatcatcctactatcgtatctgcaaaagacgagaaggtagaagccatg
ttggaattgcccaatgaaacttaccagctcattattcagaaaaacgaggaaaggaatttc
gatacccattgccaatgtgatgaacatgaatttgcattgtgcgtgcacaaaaccgccctg
tttttacatttgttaaaccagtacggcccgtattatttcgactccctacgcaattgggat
aaagaaaagaataaattattgtctttatacggctattccctggaggataacctggatggc
aagtttgcgttctcttataataacggtaaacctttccttcgcgttcttgatccaagtatc
aagaaagtggaatcggccatgccttctcccaaggaagaaccgccaacccaaacaattgcg
ccgagcaagagaataggggtggtgctgaatgccaatgaaacgttatatccttatttctcc
gttgatctcatcaccggcgaagccaacgaagagggtgatgcattcgtaacgctgatcagc
aaacttgatctcacgaagtatatcgattactatcaattcaaggagcaggatcgcgaagtc
attgcccctaccaggaaattgcagcaatcggaaatcaacaagttcctgaataaaaattct
ccctttgccgggatttgggataatatcatccacgagtcgggcgattctcttcccaccgat
acgaaggagctgatattggaatatttacatcccaagttggtgaaatatttcaaccaactc
agcgagcaaccgctcgtattcatattaaaagaaagacaggcttttaaaaccaagagcttg
ttgccggtcaatatcacgggcgagctgttgcagatcagcctgcacaccaaagtggaaggc
gaccaggtgatcattaccgcctccgttcaaatcgaagacgaagaagtgaatcttgccgat
aacgaatggagcagccccatggtctttatccataattcggatgcttacctgtttaaaatt
cctttcgatgcgctacaggccgaactctatcaaaatcaaggcaacgtaaaagtaccttta
tccggatgggggcaatatttgaacgaaaatttattgcctttaggtaaggattatcccatt
tcttttgatccggctttaatggctgaagtgagtggcgaaataccggaatacagggtgcag
ttaaaggaaatcggtgatactttcgttattcaacccactttcaattaccgcggtcatgat
gtggagtggaacaatgaaacccagatcacgatccaggaagataacaaggtgctggtgatt
caccgcaacaaggaagccgaagaagaatttatccagaagctgcgtggtttgcataccagc
tttgctgcaccgacaaactttaattacttctatttaagatctaaagaagcgctggtgaat
aactggtttttcaacttcttcgacacgttgaaggagatgaatgtccgcgtattcggcttt
gacaacctccgcaattttagattcaatacgcataaacccgttaccaatttacaggtaagc
tccggcatcgattggttcgatgcgcaggtagaggttgtgtacggggaccaaaaggttagc
atcaaggatattaagaaagccttggctaacaagcagaactatgttcagttggccgatggc
accctgggtttattgccggaagaatggctgaagaaatattctttactgttcaaaatcggt
gaggaaaaagacaagggcggcctgaaactatctaagtacaacttcaacgtcatcgatgaa
ttgtacgagtttatcgatgatgaacaagtgctgcgcgaactggatgaaaaaagaacgaaa
ctggtgcaattcgacgagatccgtcaccagccgctacccggtaatgtgaacgccagctta
cgtccctaccaggagagtggtttccaatggttaaattatctcgatgaagtgaaatggggc
ggtatcctggcagatgatatgggtttgggtaaaaccattcaaacgctcaccttcattcaa
cattataaaaataagcacggcagatgcttgaccctcgtggtttgtcctactacgttgatc
tataactgggaaaacgagatcaagaagtttacgccaacgatcgtgcatcatatacatcac
ggtcccgcaaggatcaagtcgccggaagcattgcggccattcgacgtgatcatcactacc
tatggtacattgcgcagcgacatccagatgtttatgaagctcgaatttgattacgtgata
ctggatgaatcacaagcgatcaagaatccgcaatcgaaagttacgaaagcggcgcaatta
ttacataccaagaataggttagcgctgagtggtacgccgatgcaaaacaacactttcgat
atttacgcgcagatgaacttcttaaatccgggcatgttgggtagcattgatttcttcagg
aatgaatttgccacaccgatcgataagttccaggatgaagaacggaaagatcacctgcgt
aaactgatatatccatttatactcaggagaacgaaagagcaagtggcgaaagacctgccg
gaaaaaatcgaaacggtcatcttctgcgaaatggatcacgagcaaaggcagatttacgat
gcctaccgcaatacttaccgttccaagatactcggcgtcatagaagagcaagggatggag
cgttcgcaattaacgatcttgcaaggtttaatgaagctgcgccagatatgtgactctccc
gcgattttgaacgaaacggagcagtacccgaaccattcagtcaagctgcacgagttgacc
cgcgagatgtcagaaaacatcagcaatcacaaggtactcgtattttcgcagttcctcggc
atgctgggtttaatcaaggagaaattgattgctcaaaaaataccgttcgaatactttgat
ggcagcacttccacaacggaaagggaacgcgcgatacagaacttccagcagaacagcgaa
tgccgcgtattcctcatctcgctgaaagcgggtggtgtcggtttgaacttgacggctgcc
gattatgtttacattgtcgatccttggtggaacccggcagtagagcaacaagccattgac
cgtacgcaccgtatcgggcaaacgaaaaatattttcgcgtaccgcatgatctgtaaagac
acggttgaagagaagatattggaattacaggaacgtaagaaatccttggtaaaagaaatt
gttgccgatgaaaatggtttcgtgaagaagttgacaaaagaagatgtgatgtacctattc
agttaa
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