Petrocella atlantisensis: PATL70BA_0091
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Entry
PATL70BA_0091 CDS
T05737
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
cbar
Petrocella atlantisensis
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbar03009
]
PATL70BA_0091
Enzymes [BR:
cbar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
PATL70BA_0091
Ribosome biogenesis [BR:
cbar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PATL70BA_0091
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
GSKIP_dom
PIN-TPR-GreABC
Motif
Other DBs
NCBI-ProteinID:
VDN45930
UniProt:
A0A3P7NX94
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All DBs
Position
1:85054..86007
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AA seq
317 aa
AA seq
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MIEINITPQNQHQRIDKFMLKVLPGMSKSFCYKMFRKKNITLNGKKINGHEICHEGDLIQ
VYFTQETYDHFATRIQEKRFESDGVLDVVYEDDQLIVINKAIGVLSQDDGTAVSVIDQIR
SYYEEKNVQMDTGFRIGVSNRLDRNTTGIVLSAKSLPMAQIINQKIKNHEVVKLYKSIVF
GKIDKDIELKDTIHKDHNNNKVSIDQDGEIMIHTLLKPLRWNESFTEVEIEIKTGKTHQI
RVHLASIGHPVIGDNKYGNIHLNKDFKRKYNLNHQLLHAYSYQFIEGDIPLDNERYYKPF
IAINPDLYNTIAKAVFK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaataaatattacacctcaaaaccaacatcaaagaattgataaattcatgctt
aaggtattgcccggtatgtcaaaaagtttttgctataaaatgttccgcaaaaaaaatatc
accctaaacgggaaaaaaataaatggtcatgaaatttgtcatgaaggggatttgattcaa
gtttacttcacgcaggaaacttacgatcactttgctacaagaatacaagaaaaaagattt
gaaagtgatggcgttttggatgtggtttatgaagacgatcaacttatagttatcaataag
gccattggtgtgttatctcaagatgatggaacagctgtatccgttatagatcaaatcagg
tcctattacgaagaaaaaaacgttcaaatggatactgggtttagaattggggttagtaac
cgtcttgatcgcaataccaccggcattgtgctttctgctaaatccttgccaatggctcaa
atcatcaatcaaaagattaaaaaccatgaagttgttaaattgtataaaagtatagtattc
ggtaagattgataaagacatagagctaaaggatacgattcataaagatcataataacaat
aaggtatcgattgaccaagatggggaaatcatgattcatacccttctaaagccattaaga
tggaatgaatcttttactgaagttgaaattgagatcaaaacaggtaagacccatcaaata
cgtgtgcatttagcatctataggtcatcccgttattggcgacaacaaatatgggaatata
cacttaaacaaggactttaagcgtaaatataatttaaaccatcagttactccatgcttat
agttatcagtttatagaaggtgatatccctcttgataatgaacgttactataagccattt
attgctatcaatccagacctatataataccattgcaaaggctgtgttcaaatga
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