Marnyiella aurantia: H1R16_08255
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Entry
H1R16_08255 CDS
T08940
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cbau
Marnyiella aurantia
Pathway
cbau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H1R16_08255 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbau03021
]
H1R16_08255 (rho)
03019 Messenger RNA biogenesis [BR:
cbau03019
]
H1R16_08255 (rho)
Transcription machinery [BR:
cbau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
H1R16_08255 (rho)
Messenger RNA biogenesis [BR:
cbau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H1R16_08255 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
AAA_22
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QMS97712
UniProt:
A0A7D7RI83
LinkDB
All DBs
Position
1788665..1790647
Genome browser
AA seq
660 aa
AA seq
DB search
MFNLETLRSKSIAELTKIAKDLEVKLARNSDENTIIFAILDFQASNSKTAKEYYNSTEKA
AAPAGEESAPAPKAAPKTPKKPAVKKKPATAKSEAAPMPAMIEITETPAEETAAEQTPAA
EEAPKEKPARQPRKKKEPVVTDPEAVAEEEQTAVTEETPQEASEQKPQRRDQNKPQKQAQ
KQQPQNRPAQQQQTPVQNQSQQTQTQTQPQAPAQQQQQQQQQQQQPQQQGQGQNQQQSQG
QNPQQNRNQSQNGGNQNENRPQNGNQHKNQKHQRNQDNHEETETKKEYSFDGMVTIEGVL
EILPDNYGFLRSPDFSYISSPDDVYVSTAQIRNYGLKTGDAVKGIVRLPKEGEKYFSLMK
PVEVNGRDLAFIKDRVSFEYLTPLFPEEKFNLAGKGSTHSTRIVDLFSPIGKGQRAMIVA
QPKTGKTMLLKDIANAISANHPEAYMMVLLIDERPEEVTDMERSVNAEVIASTFDEAAEK
HVKVANLVLAKAQRMVECGHDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHKPK
RFFGAARNIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKIANKRIYPAI
DLVSSSTRRDDLLLDEKTMQRMWILRKYLSDMNPMEAMEFVNRSIKGTQSNEEFLMSMNK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacttagaaacactaaggtctaaatccattgcggaactgaccaaaattgctaag
gatttggaggtgaagctggccagaaacagcgatgaaaacaccataatcttcgcaatactg
gactttcaggcttctaattccaaaactgcaaaggagtattataacagcaccgaaaaagct
gctgctcccgccggcgaagaaagtgctcccgctccgaaggctgcacctaaaacacccaaa
aagcctgctgtcaaaaagaaacctgccactgccaagtcagaagccgcaccaatgcctgcg
atgatagaaatcaccgagacaccggctgaagaaaccgcagcagagcaaacacctgccgct
gaagaagctccaaaagagaaaccggcgagacagcccagaaagaaaaaagaacctgttgtt
acagatccggaagcggtagctgaagaagagcaaacagctgttacagaggaaacaccgcag
gaagcatcagaacaaaaacctcagagaagggatcagaacaagcctcagaaacaggcacaa
aaacaacagcctcaaaacaggcctgcgcagcaacagcagacaccggttcaaaaccaatct
cagcagacgcagacgcagactcagccccaggctccggctcagcaacaacaacaacaacaa
caacaacaacaacaacctcagcagcaaggtcagggtcagaatcagcagcaaagtcagggt
cagaatccacaacagaaccgtaatcagtcccagaacggcggtaaccaaaacgagaaccgt
ccgcagaacggaaatcagcataaaaatcaaaaacatcagcgcaaccaggataaccatgaa
gaaactgaaactaaaaaggaatacagttttgacggaatggtgaccatagaaggtgtgctg
gaaatccttccggataattacggattcctccgttcaccggatttctcctatatctcctct
cccgacgatgtttacgtatctaccgctcagatccgcaattacggactgaagaccggtgat
gccgtaaaagggattgtcagacttccgaaagaaggagagaaatatttctccctgatgaag
cccgtagaagtaaacggccgcgatttggcttttataaaagaccgtgtttcgtttgaatac
cttactccgcttttcccggaagagaaatttaatcttgcaggcaaaggttctacccattcc
acccgaatcgtcgatttattctcaccgataggtaaaggtcagcgtgctatgattgtggcg
cagcctaaaacaggtaagaccatgttacttaaggatattgccaatgcaatttctgccaat
cacccggaagcttatatgatggtccttcttattgatgaaagaccggaagaagttaccgat
atggaaagaagcgtaaatgcggaggttattgcctctacatttgacgaagctgcggaaaaa
catgtaaaagtagccaacctggtccttgccaaagcacagcgtatggtggagtgcggtcat
gatgtggtgatcctgctcgactccattaccagacttgccagagcctataacaccgttacc
ccggcctcaggtaaaatcctttccggtggtgtagatgccaacgccctgcacaagccgaaa
cgtttcttcggagcggcgcgtaatattgaaggcggcggttccctgaccattatcgctacc
gccttaattgataccggttccaaaatggacgaggtaatttttgaagagtttaaaggtacc
ggtaacatggagcttcagctggacaggaagattgccaacaaaaggatctatcccgctatt
gatcttgtatcctccagcacgcgtagagacgacctgcttctggacgaaaagaccatgcag
cgtatgtggattcttaggaaatacttatcggatatgaacccgatggaggctatggaattt
gtaaaccgcagcataaaaggaacccaaagcaatgaagagttcctgatgagcatgaacaaa
taa
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