Coxiella burnetii Dugway 5J108-111: CBUD_1544
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Entry
CBUD_1544 CDS
T00583
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cbd
Coxiella burnetii Dugway 5J108-111
Pathway
cbd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBUD_1544 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbd03400
]
CBUD_1544 (uvrB)
DNA repair and recombination proteins [BR:
cbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBUD_1544 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CBUD_1544 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_22
IF2_N
dCache_2
Motif
Other DBs
NCBI-ProteinID:
ABS76877
UniProt:
A9KCU2
LinkDB
All DBs
Position
complement(1545537..1547555)
Genome browser
AA seq
672 aa
AA seq
DB search
MSKAFKLTSKFKPSGDQPQAIEKLVAGLEDGLAYQTLLGVTGSGKTFTIANAIEKVQRPT
LILEPNKTLAAQFYAEMREFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDASINDHIE
QMRLSATKAITERHDTIIIATVSAIYGLGDPDSYLKMLLHLTRGDQIDQRKILQRLAELQ
YTRNDLELRRATYRVNGDIIDIYPADSEREAVRVELFDDEVENLSYFDPLTGEMLRRVPR
ITVYPKTHYVTPREKLLSTLDQIKIELKERLSQLEKANKLVERQRLEQRTKFDMEMILEL
GYCSGIENYSRYLSGRNEGEPPPTLIDYLPKDALLIIDESHVTIPQLGGMYRGDRARKET
LVEYGFRLPSALDNRPLRFDEFEKLAPQTIFISATPGPYEEKQSDQVVELLVRPTGLIDP
EIEVRPVATQVDDLLSEIKKRAAQNERVLVTTLTKRMAEDLTEYFTEHNVRVRYLHSDID
TVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNVHGKAILYADRITDSMKRAMEEAERRRIAQSAYNEKHHITPKSIQKAVTEIIEGAR
TYTERGRFVNQAQLIAEEESKYIAMTPKQLAKELRKLEEQMYHHARNLEFEEAAAVRDKI
QHIRKGLLEVKE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagcgtttaaattaacatccaaattcaagcccagtggggatcagccgcaagca
atagaaaaattggtcgccgggttggaagatggcttggcttatcaaacgcttttgggggtt
acgggatcagggaaaacctttacgattgcgaatgccattgaaaaagttcaacgacctacg
ttaattttggaaccgaataaaactttagccgcgcaattttacgctgaaatgcgtgagttt
tttcctgaaaatgcggtggaatattttgtttcttattatgattattatcagcctgaagcc
tatgttccgagttcagacacttatatcgaaaaagacgcttccattaacgaccacattgag
caaatgcgtttatcggcaacgaaagcaataacggaacgccatgatacaattattatcgcc
actgtttcggccatttacggtttaggcgatccagattcgtatttgaaaatgttattgcat
ttaacccgcggtgaccaaattgatcaacggaaaattttgcagcgtttggccgagttacaa
tacacccgcaacgatcttgaattacgacgtgccacctaccgtgtgaacggcgatattatt
gatatttatcccgcagattccgaacgtgaagctgtgcgcgtggaattgtttgacgacgaa
gtagaaaatctcagttattttgacccgctgacaggggaaatgctaagacgtgtcccgcga
ataacggtttatcccaaaacccattacgttacgccacgagaaaaactcctatctacactt
gaccaaattaaaatagaattaaaagaacgattatcccaattagaaaaagccaataaatta
gtggagcgtcagcgtttagaacaacgaactaaatttgatatggaaatgattttagagttg
ggttattgcagcggcattgaaaattattctcgttatttgtctggtcgaaacgaaggggaa
ccgccgcccactttaatcgattatttacctaaagatgctttgttgattatcgatgagtcg
cacgtgaccattccgcaactcggcggcatgtatcgcggtgaccgagcgcgtaaagaaacc
ttagtggaatacgggtttcgcctcccttctgcattggacaatcggccgctgcgttttgat
gagtttgaaaagctagcgccgcaaaccatttttatctcggcaacgccgggaccttatgag
gaaaaacaaagcgatcaagttgtggagttgttagtaagacccacgggcctaattgatcct
gaaattgaagtccgacccgttgccactcaggttgatgatttgctctcggaaattaaaaaa
cgagcggcgcagaatgaacgggttttagtaacgacattgaccaaacggatggcggaagac
cttactgaatattttacagagcataacgttcgtgtgcgttacttgcattcggatattgat
accgtggaacgggtggaaattattcgtgatttacgcttgggcgtttttgatgtgcttgtc
gggattaatttattgcgggaagggttggatattccggaagtttctttagtggctatttta
gatgccgacaaagaagggtttttgcggtccgaacgctcgctgattcaaacaatggggcga
gcggcccgaaatgtgcacggtaaagctattttatatgcggaccggattacggattccatg
aaacgagcgatggaagaagccgaaagaagacgaatagcgcaaagcgcatataatgaaaag
caccatattacgccaaaaagtatccaaaaagccgtcaccgaaattatcgaaggcgctcgt
acttataccgaaagaggccgtttcgttaatcaagcgcaattgatagctgaagaagaatcg
aaatatattgccatgacgccgaaacaattggcaaaagagttgcgtaaattggaagagcaa
atgtatcatcacgcacgaaacttggaatttgaagaggcggctgccgttcgcgataaaatc
cagcatatacgaaaggggcttttggaagttaaagaatga
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