Cognaticolwellia beringensis: B5D82_18580
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Entry
B5D82_18580 CDS
T05628
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
cber
Cognaticolwellia beringensis
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cber03009
]
B5D82_18580
Enzymes [BR:
cber01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
B5D82_18580
Ribosome biogenesis [BR:
cber03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B5D82_18580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
Motif
Other DBs
NCBI-ProteinID:
ASP50093
UniProt:
A0A222GEK3
LinkDB
All DBs
Position
complement(4417081..4418043)
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AA seq
320 aa
AA seq
DB search
MTDSPRPQVRFITVDSEDAGQRIDNFLVKTLKGVPKSMLYRLLRKGEIRVNKKRTKPEYK
LVDEDIIRVAPIRVSENTNTVSTQLNVVANLEKQILFEDDRLIVINKPSGMAVHGGSGLS
FGLIEALRALRPDARMLELVHRLDRDTSGCLVVAKKRSALRHLHEQLRNKTVQKFYHALV
KGRWSTKLTRVAEGLKKNDLKSGERVVVVDNINGKESETRFKVLQHYKNATLVRAFPVTG
RTHQIRVHCQTKGHSIACDAKYGHEDFDLEMKTLGLKRLFLHAASIEFIHPLSNERIKIE
APLEPSLEKLLKKLTKADVH
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacagatagcccaagacctcaagttagatttattaccgtagacagtgaagatgcgggt
caacgtattgataactttttagtgaaaacacttaaaggtgtaccaaaaagtatgctgtat
cgtcttttgcgtaaaggcgaaatacgggtcaataaaaagcgtacaaaacccgagtataag
ttggttgatgaagatattattcgtgttgcacctattcgtgtttctgaaaatacgaatacg
gtgtctacacaattaaatgtggttgccaatttagagaagcaaatactatttgaagacgat
cgtttaattgttattaacaaaccgtctggcatggctgtgcatggtggtagtggtttaagt
tttggtttgattgaagcattgcgagctttgcgaccagatgcgcgaatgctggaacttgta
catcgactagatcgtgatacttctggttgtttagtggtggcgaaaaaacgctctgccttg
cgtcatttacacgagcagctaagaaataaaaccgtacagaaattttaccatgctttagtt
aaaggtcgttggtcgactaaattgacgcgtgttgcagaaggtttgaagaaaaatgactta
aagtcgggtgaacgtgttgtggtagttgacaatatcaacggtaaagagtctgaaacgcgt
tttaaagttcttcagcactataaaaacgccacactcgttagagctttccctgttaccggt
cgtacacatcaaattcgtgtgcattgtcaaaccaaggggcattcgattgcctgtgacgca
aaatatggtcatgaagattttgacctagaaatgaaaacactgggattaaaacgtttgttt
ttacatgcggctagtattgaatttattcatccgttaagtaatgaacgaattaaaattgaa
gcacctttagagccttcgttggaaaaactgttaaagaaattgactaaagcggatgtacat
tag
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