Cercospora beticola: CB0940_02516
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Entry
CB0940_02516 CDS
T09388
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cbet
Cercospora beticola
Pathway
cbet03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CB0940_02516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbet03400
]
CB0940_02516
Enzymes [BR:
cbet01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CB0940_02516
DNA repair and recombination proteins [BR:
cbet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
CB0940_02516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
LIG3_BRCT
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
35426326
NCBI-ProteinID:
XP_023457764
LinkDB
All DBs
Position
3:complement(717699..720793)
Genome browser
AA seq
991 aa
AA seq
DB search
MMEIDQDADAKREEEMMYGHGAMTKEELNEKYPNRPHNHSKTLPFHDLYLDLFNPLNDNK
KKPTGAAIARKKLGPHGGPSQAPNEIRRQIIDRFIGRWRKEVGNDIYPAFRLIVPEKDRD
RGMYGLKELTLGKMLIRILKIDKNSDDGYNLTHWKLPGLKSTSATAGDFAGRCFDAISKR
PMRSEPGDMSIAEVNERLDRLSVAQKEENQRPILEEFYSRMNAEEMMWLIRIILRQMKVG
ATEKTFFDLWHPDAESLFNISSSLRRVCWELYDKNVRLEGDNRGITLMQCFQPQLAAFQM
KSMEQMVARMNPTEQDPVFLIEEKLDGERMQLHMIEDDSQRGGVRFGFWSRKAKDYTYLY
GNGFHDDNAALTRHIEDAFRPGVRNIILDGEMITWNMKEDCVVGFGTLKTAAIEQQQNPF
ADGNRPLFRVFDCLYLNDEPLTQYTLRDRRRALEGAIQPVHRRLEIHTYIEGKTATDIEP
ALRLVLEEGSEGLVIKNPRSEYRLNDRNDDWIKVKPEYMTEFGESLDCIVVGGYFGSGKR
GGFLSSFLCGLYLPEYHRKHIEPNAHPQKTWSFFKVGGGFSASDYAQIRHLTDGKWKDWD
RKKPPTEWIELAGGDRQYEKPDMWIKPEDSVVVSVKAAQVGGTDQFRTQRTLRFPRFKRL
RTDKSWDQALSWDEFDALKAKADEEQAEKKLKIDETKRQRTSKRQKRALVIQGQVDSLAK
PYAGPATRVFEGLSFFIMTEAGKPLKKSKAELEQLVKANGGKIVASQKDPDTILIADRNV
VKVASIKKNDDRNIIKPCWLLDCIKQSELDVGRPNLLLPLEPQHLEYTHTADRGKYDGNI
DEFGDSYVRDVTPQDLLSLFKNMPAKIEDGFEPSEVLEQFIEHGHGLDEMEALMFSGITA
FFESPEPFTKRLFEFAGGSVADSLQSNEVTHVIVKGGSKAVPGIRKDIAARPRLPRIVVD
DWVLESWAEETRLDEEGMSVTIQDFWYCTEC
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaatcgaccaagatgcagacgcgaaacgagaagaggagatgatgtatggccat
ggcgccatgacaaaggaggagctcaacgagaagtatcccaatcgacctcataatcactcg
aagacactgcctttccacgacttgtatcttgacctcttcaatccattaaacgataacaag
aagaagccgaccggcgcagcgattgctcgcaagaaactgggacctcacggcggacctagt
caggccccgaacgagattcggcgacaaatcatagatcgattcattggtcgctggcgcaaa
gaagtcggcaatgatatttacccagctttccgactcattgtgccagaaaaggatcgtgat
cggggaatgtatggactgaaggagttgactttggggaagatgctaatcagaatcctcaaa
attgacaagaacagcgacgacgggtacaatttgacacattggaagcttcctggactcaaa
tcgacaagcgccactgctggtgactttgcaggacgatgttttgacgcgatcagcaagcga
ccgatgcgctcggagccaggcgatatgtctattgctgaagtgaacgagcgactggatcga
ttatcagtggcgcaaaaggaagaaaatcagcgacccattctggaagagttctacagcagg
atgaatgccgaagagatgatgtggctcatccggatcatcttgcgtcaaatgaaggtcgga
gctaccgaaaagaccttctttgatctttggcatcctgatgctgagagcttgttcaacatc
tcgagtagtctacggcgagtgtgctgggagctctacgacaagaacgtcagacttgagggc
gacaatcgaggcatcaccctcatgcagtgtttccagcctcaattagccgccttccagatg
aagtccatggagcagatggtggcgaggatgaacccgactgaacaagacccagtgtttttg
atcgaagagaagcttgacggagagcgcatgcagctgcatatgatagaggatgacagtcaa
cggggaggcgtacgtttcggcttttggtcacgaaaagccaaggactacacgtatctatac
ggcaatgggtttcacgatgacaatgcagctttgacaagacacatcgaggatgccttcaga
ccaggtgtgcgcaatatcattctcgacggcgagatgatcacttggaacatgaaggaagac
tgtgtcgttggctttggcactctcaagacagcggcgatcgagcagcagcagaaccctttc
gctgacggaaaccggcccctgttcagagtgttcgactgcctgtacctcaacgatgaaccg
ctgacacaatatacgctcagagatcgccgaagagcgctagaaggcgccattcaacctgtg
catcgacggctggagattcacacctatattgaaggcaaaacagctacagacatcgagccc
gcgttgcgtctagtcttggaggaaggcagcgaaggtcttgtgatcaagaatccgcgttcg
gaatacaggctcaacgatcgaaatgatgactggataaaggtcaagccagagtacatgaca
gagttcggcgaatcgctagattgcatcgtagtgggcggctacttcggatctggcaagaga
ggcggtttcctgagcagctttctctgcggcttgtacctcccagaatatcaccgcaagcat
atcgagcccaatgcgcatccacagaagacgtggtccttcttcaaagttggcggaggtttc
agtgcttcagattatgctcagattagacacttgactgatggcaagtggaaggactgggat
cgcaagaagccgcctactgaatggatcgagctcgctggcggtgatcgacagtatgaaaaa
cctgacatgtggatcaagcccgaggactctgtggttgtctctgtcaaagctgcacaggta
ggtggcacagatcaattcaggacacagcgaactcttcgttttccgcgcttcaaaaggctt
cggacggacaagagctgggatcaagcgctgtcttgggacgagttcgatgcactaaaggcc
aaggcggacgaagagcaggcggagaagaaactgaagatagacgagacgaagcggcaacgt
acatccaaacgacagaaacgggcgctagtgattcaaggacaagtggacagccttgccaaa
ccttatgcaggaccagcaacaagagtctttgaagggctgagctttttcatcatgactgaa
gctgggaaaccgctgaagaagagtaaggctgagctcgaacagcttgtcaaggccaacggc
ggcaagattgtcgcatctcagaaggatccggacacaatcctcatcgcggaccgcaacgtg
gtaaaagttgcctcgataaagaagaatgatgatcgcaatattatcaaaccatgctggttg
ctcgattgcatcaagcagagcgagctggacgttggacgtccgaacttgttgcttccactt
gaacctcaacacctggaatacacacacacagcagatcgaggcaagtatgacggtaacatt
gacgagtttggcgacagctatgtcagagatgtgacgccgcaagacttgctttcgctgttt
aaaaacatgcctgccaagatcgaagatggctttgagccttcggaggttttggagcaattc
attgagcatggccacggactcgacgagatggaagctctcatgttctctggcatcacggct
ttctttgaaagcccagagccgttcacgaaacgcttgttcgaattcgcaggtggtagcgtt
gcagattcgctgcaaagcaacgaagtcacccatgtgatcgtcaaagggggtagcaaagct
gtacctggaatccggaaagacattgccgccaggcctcggttgcccaggattgttgtggat
gattgggtcttggaaagctgggcagaggagacgagacttgatgaagaaggtatgtctgtc
acgatccaagacttttggtactgtacagaatgctga
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