Cercospora beticola: CB0940_02684
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Entry
CB0940_02684 CDS
T09388
Name
(RefSeq) TFIIH basal transcription factor complex p47 subunit
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cbet
Cercospora beticola
Pathway
cbet03022
Basal transcription factors
cbet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CB0940_02684
09124 Replication and repair
03420 Nucleotide excision repair
CB0940_02684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbet03021
]
CB0940_02684
03400 DNA repair and recombination proteins [BR:
cbet03400
]
CB0940_02684
Transcription machinery [BR:
cbet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CB0940_02684
DNA repair and recombination proteins [BR:
cbet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CB0940_02684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Tfb4
TACO1_YebC_N
Motif
Other DBs
NCBI-GeneID:
35426494
NCBI-ProteinID:
XP_023456791
LinkDB
All DBs
Position
3:1225285..1227479
Genome browser
AA seq
452 aa
AA seq
DB search
MADSDHEYDEDDEIHTNGRSMASRPKPRALARWEEGATGTGDIRQGADGNLLEMLGGAEE
AAKRKRLVKDTTPLQRGIIRHTILIIDLSLAMAEKDLRPTRLLLTLTYVIAFIREYFEQN
PISQLGILGMRDGLAIRVSDMSGNPNDHITAVKGLRSTDPKGNPSLQNALEMARAALYHT
PSHGTREVAIILGALHSSDPGDIHDTIKACIKDKIRVNIIGLAAQMFICAEICRKTNQGD
TNCYNVAVDEVHYRELLMGITTPPVVRATDVEAQKRNQAALLMMGFPSRMVEERATLCAC
HGNLTRGGYLCSRCKAKVCSLPATCPTCELTLILSTHLARSYHHLFPLQNWDEVSWTRAQ
SKGSTQCFGCQAPFPPAAGKVDAVNGSGEEGTRQKRAEGASESSRYECSTCQQHFCIDCD
VFCHEVVHNCPGCQSSTHLPGAQNGDMDVEPS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggctgactcggaccacgagtacgatgaggacgatgagatccatacaaatggcaggtcc
atggcatcacgtcccaagccccgagcgctggcaagatgggaagaaggcgccactggaaca
ggtgacatccgccaaggcgcagatggaaacctcctggaaatgctgggtggtgcagaggag
gctgcaaagcggaagaggctcgtcaaagacaccactcccttgcagcgaggcatcatccga
cacacgatccttatcattgacctgtcgttagccatggctgagaaggatctgcgccctaca
cgattgcttctgaccttgacctatgtcatagcgttcattcgtgagtacttcgaacagaac
cccatctcacagcttggaatactaggaatgcgtgatgggctggcaatacgagtcagcgac
atgtccggcaacccgaatgaccacattactgcggtcaaaggcctacgaagcacagatcca
aaaggcaatccatcgctacaaaatgcgctagagatggcacgagcagcactgtatcacacg
ccgtcccacggcacacgcgaagttgccatcatccttggagcattgcacagctcggaccct
ggagacattcacgacacgatcaaggcctgtatcaaggacaagatcagagtcaatatcatt
ggcttggcggcacagatgttcatatgcgccgagatctgtcgaaagacaaatcaaggcgat
acgaactgctacaatgtcgcagtggacgaggttcactatcgagagcttctaatgggaatc
acaacgcccccggttgtgcgggccaccgatgtcgaggcacagaagcggaaccaagcggcc
ttgctcatgatgggcttcccctcgcggatggtggaggaaagagccactctctgtgcgtgc
cacggaaatctcaccagaggaggctacctctgcagtagatgcaaggcgaaggtctgcagt
ttgcctgccacgtgcccgacgtgtgagctcactctcattctctcgactcacttggccaga
tcctaccatcacttattccccctgcagaactgggatgaggtctcatggacgcgcgcacaa
tcgaaaggcagtacccagtgttttggttgccaggcgccatttccgcccgctgctggcaaa
gtcgatgcggtcaacggctccggcgaagaaggtacgagacagaaacgcgcagaaggtgcg
tccgagtcgtccaggtatgagtgctcgacttgtcagcagcacttctgtatcgactgcgat
gtcttctgccacgaagtagtccacaattgtcctggctgtcagagtagtacccatctaccc
ggtgcacaaaacggcgatatggacgtagaacccagttga
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