Cercospora beticola: CB0940_03421
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Entry
CB0940_03421 CDS
T09388
Name
(RefSeq) hypotheticalsprotein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cbet
Cercospora beticola
Pathway
cbet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CB0940_03421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbet03021
]
CB0940_03421
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_03421
Transcription machinery [BR:
cbet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CB0940_03421
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CB0940_03421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CFIA_Pcf11
VHS
zf_UBZ
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
35427231
NCBI-ProteinID:
XP_023456830
LinkDB
All DBs
Position
3:complement(3085146..3088049)
Genome browser
AA seq
669 aa
AA seq
DB search
MSSRSPRGSFSGGSSAEVAADFEESLKDLQSNNRYEISNLTVIAKENTEHAQAISKALEN
HIKQTSPTRKLPALFVLDSIVKNVGTPYTVYLGRNLYNTFMEAYTLVDNATRRHMDAMLR
TWKEPVPGSIDPRPVFPRETVQPLENAMIKARAALEKIRQSQTQFQGVATPPQQNGQYPR
PPSHTPQPMYPGHPVPQATPQSQPYAYQPPLTNLNNEIESVKRDIDSLIPRFQYQLASRP
HDVGLQTQFNALNQLRNLLNIQRVSSSELQQIKQQVSSLAPAVPAFPPPVPPPQVPQPQW
QTPTPLPLAFQPPLPIPTATPSHAGPPPNLTPDALNGLQALLAGTQKPSTPQLRAAIPGF
HNASHSQLNAVQSHTSSAPQANDAADLIASLTKAGLIKPVSSAAPPANPVATAPAASDPT
AELLKSLQAVAPLPSQAATPLQSHAQPVRAHLQVPITAASLKTFRPELVAAMYDALPNQC
STCGRRFSTTEEGRQKKSLHLDWHFRTNQRIADPNTNRGHHRNWFPNEMEWIQHIEFDPS
TTTATAKENTEAAKAQKSPQEQVVRAPAGMTKSTCTICYEDLHSTYSEEHQDWVFANAGY
MNKKIVHATCLAELTKSQPVASIDRGALAAALASVGANQRERSSTPDSSLGKRKAESEMA
GNGPRIKMQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagatcgccgcgcggctccttctcaggcgggtcttctgctgaagtggccgcc
gacttcgaagaatctctgaaagatctccagagtaacaacaggtacgagatcagcaacctg
actgtcatcgccaaagaaaatacggagcacgcgcaggcaatatcgaaagcactggagaac
cacatcaagcagacgtctccaacgcgcaaactgccagcgctcttcgttctcgacagcatt
gttaagaatgtaggcacaccctacacagtttaccttggtcggaacctctacaataccttc
atggaagcttacactctggtcgacaacgcgacaaggcgccatatggatgcgatgctgcga
acgtggaaagagcccgtgcctggatctattgacccgcgacctgtcttccctcgagagact
gttcagccccttgaaaacgccatgataaaggctagggcggcgctggagaagatcaggcag
tcacagactcagtttcaaggcgtggcgacaccacctcagcagaatggccaataccctcgg
ccgccttctcacacgccgcagccaatgtatccaggccaccccgttccgcaggctacacca
cagtctcagccgtatgcataccagccgccactcacaaacttgaacaacgagatcgagagc
gtgaagcgtgacatcgactcattgatcccaagatttcagtaccagcttgcaagtaggccg
cacgatgtaggtctacagactcagttcaacgcgctgaaccagctgcgcaacctcctcaac
atccagcgtgtgagctctagcgagcttcagcagatcaagcaacaggtctcctctctggcc
ccggcagtgccagcatttccaccacccgtacctcctccgcaggtgccccagccgcagtgg
cagacaccgacaccacttcctctcgcattccaaccgccgctcccgatcccgactgctacg
ccttcgcatgctgggccaccacctaacctgacccctgacgcattgaatggcttgcaagca
ttgttggccggcacacaaaagcctagcacaccgcagctgcgcgcggccattcctggattt
cacaacgcgagtcactcccagctcaatgcagtccagagccataccagctcggcacctcaa
gccaacgacgcggcagatctaatcgcgtctttgacgaaggccgggctcatcaagcctgtc
tccagcgctgcaccgcctgccaatcccgtcgcaacggcaccagctgcatcagatccgact
gcagaattgttgaagtcacttcaagcggtagcgccgcttccttcacaagccgcaactcca
ttacagtcacacgctcaacctgtacgagcgcatctccaagtgccgattacagcagcgagt
ttgaagaccttccgccccgagctagttgccgcgatgtacgatgcgttgccaaaccagtgc
agcacatgcggacgacgcttttccaccaccgaagaaggcaggcagaagaagagtcttcac
ttggactggcactttcgaacaaaccagcgtatcgccgatcccaacaccaaccgcggccac
cacaggaattggttcccaaatgagatggagtggatacagcacatcgaattcgatccttcg
acaactaccgccactgcgaaggaaaacacggaagcagcaaaggcgcagaagagtccacag
gagcaggttgtccgggccccagctggcatgaccaagagcacatgcaccatttgctacgag
gacttacatagcacgtattccgaggagcatcaggactgggtcttcgccaatgctgggtac
atgaacaagaagatcgttcacgcgacgtgtctcgcagagttgacaaagtcgcaaccggtg
gctagcatcgacagaggagcacttgctgcagcgctcgcaagcgtcggtgccaaccagcga
gagcgcagctcaacaccggactcatccctggggaagagaaaggctgagtctgagatggcg
ggcaacgggcctcgcatcaaaatgcagtga
DBGET
integrated database retrieval system
