Cercospora beticola: CB0940_06001
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Entry
CB0940_06001 CDS
T09388
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
cbet
Cercospora beticola
Pathway
cbet03013
Nucleocytoplasmic transport
cbet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CB0940_06001
09122 Translation
03013 Nucleocytoplasmic transport
CB0940_06001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_06001
03041 Spliceosome [BR:
cbet03041
]
CB0940_06001
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CB0940_06001
Spliceosome [BR:
cbet03041
]
Complex C
Other components
EJC/TREX
CB0940_06001
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CB0940_06001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
PI-PLC-C1
Motif
Other DBs
NCBI-GeneID:
35429809
NCBI-ProteinID:
XP_023455042
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All DBs
Position
2:2295614..2299752
Genome browser
AA seq
640 aa
AA seq
DB search
MAISSASDLEPVTVIGNRLNALLDRARQEKPESTVEPALQLSSFSNEVAALHDGLDAKYD
QAYRFSCVETAAREAFYSLVHSTDIQDPAFGDVWNLLDIVLMCGDHGKCTPELVCWLLEE
LLDSQTTVGCRTVFDYLDSRRERLAQKDFHKKNLVFLRSCNELLRRLSRAEDAIFCGRVF
FFLFQTFPLGDKSSVNLRGEFHVENTTKFEVDEAAGEEMQVYPEPVEAAAASKESTPAPT
SKPGSKAVPIKAPKKTAEEVVLTTNELYPIFWRLQHDFSDPTRLFDRGNFESFKKGLANT
LLKFKKTPTVVQTKAGEEDKRGTKRKLDEHGNSESNNHLLDNYNPKYLTSRDLFDLELSD
LAFQRHILVQAMILIDFLLSLTEKAKKRLASLTVTNKSLLYAFTLNEEDTQWATSTRSAI
RDGLESRDDGRQYCRMVETVLSRDKNWVRWKVESCPSIVRGPVNTEEELQARKAVARATQ
PRRIPENAQSNIDLAFLEEGTGGGLDALKDPSRYTIPSLEQLVDQIKMEKLDAEMAMTDE
EKAQIDTAIMNAKWRALRQARAANLALLDKVESTKDLEDILSASEPVNEIEAAEPSVEDT
LGSADSVPEDPTAATGTVAEPEHLPSGEEEDKVMEGFEAS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatcatcagcatctgacttagagcccgtcacggtcatcggcaacaggctcaat
gcactcctcgaccgcgcaagacaggaaaagccggagtctaccgtcgagccagcattgcaa
ctctcgagtttcagcaatgaggtcgccgcgttacacgatgggcttgacgcaaagtacgac
caagcgtatagattttcgtgtgtagaaacagccgcccgggaagccttttactcgctggtt
cattctacagacattcaggatcccgcatttggagacgtctggaacttgcttgacattgta
ctcatgtgcggtgaccatggcaaatgcacacctgaattggtgtgctggcttctggaggaa
ttgctggacagccagacgactgttggttgccgaacggttttcgactacttggactctcgg
cgcgagcgactggcacagaaggactttcacaagaagaatctcgtgttcttgaggtcgtgc
aacgagcttctgagacgattgagtcgtgccgaagatgcgatcttctgtggtcgggtgttt
ttcttcctcttccagacctttcctctgggcgataagagttcggtcaacttgcgaggcgaa
tttcacgttgagaataccacaaagttcgaggtcgatgaagcggctggcgaggaaatgcaa
gtctatcccgagcctgtggaggctgctgctgcttcaaaagaaagcacgcccgctccaaca
agcaagccaggaagcaaggccgtccctatcaaggcgccaaagaagactgcagaggaagtc
gtactcactaccaacgagctgtatccaatattctggagactacagcatgacttctctgat
cctacgcggcttttcgatcgagggaacttcgaatccttcaagaaggggttggcaaacact
ctgctcaaattcaagaaaactccaacagtggtgcagacgaaggctggcgaggaagacaag
cgaggaacaaaacggaaacttgatgagcatggcaacagcgagagcaacaaccatcttctg
gacaattacaaccccaagtacttgactagtcgcgatttgttcgatttagagctgagcgat
cttgctttccagcgccatatccttgtgcaagccatgatcttgatcgactttctcttgtcg
ctgacagagaaagccaagaagcgcttggcaagcctaacagtgacaaacaagtcgctattg
tacgctttcacattaaatgaggaagacacacagtgggcgacgtctacgaggtcggccatc
cgagatggacttgaatcgagagatgatggaaggcagtactgccgtatggtcgagacagta
ttgagtcgcgacaaaaattgggtgcgctggaaggtcgaaagctgcccgtccattgtgcgt
ggaccggtaaatacggaggaagagctacaagccaggaaagcagttgcgagagccacacaa
ccgcgtcgtattcccgaaaatgcacaaagcaatatcgaccttgctttcctcgaagaagga
acaggcggtggtctcgatgctctgaaggatccttcccgctatacaataccctccctcgag
cagcttgtggatcagatcaagatggagaagcttgatgccgagatggcaatgacggacgag
gaaaaggcacaaatcgacaccgccatcatgaatgcgaaatggcgcgcgctccgccaggct
cgtgctgccaaccttgcgttgctcgacaaggtggaaagcactaaggatttggaagacatc
ctgagcgcgtccgagcccgtgaacgaaattgaggccgccgagcccagcgtcgaagataca
ctaggttccgcagacagcgtccccgaagatccaacagcagcaactggtacagtagccgag
cctgagcacctgccgagtggagaagaggaggacaaagttatggagggattcgaagcttcg
taa
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