Cercospora beticola: CB0940_09625
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Entry
CB0940_09625 CDS
T09388
Name
(RefSeq) Superkiller protein 3
KO
K12600
superkiller protein 3
Organism
cbet
Cercospora beticola
Pathway
cbet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CB0940_09625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbet03019
]
CB0940_09625
Messenger RNA biogenesis [BR:
cbet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CB0940_09625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_22
TPR_2
TPR_1
TPR_17
TPR_14
TPR_8
TPR_7
TPR_12
TPR_11
ANAPC3
TPR_6
TPR_MalT
TPR_4
Alkyl_sulf_dimr
DUF3239
Motif
Other DBs
NCBI-GeneID:
35433430
NCBI-ProteinID:
XP_023451425
LinkDB
All DBs
Position
7:1839049..1843717
Genome browser
AA seq
1393 aa
AA seq
DB search
MLAKAALKAAKLALDNKQYDLAIEHANSVLCSDPQNHFARLFLGRALEKQGKYDEAASIY
HSAAKAKPDDSQAWQGLVSVYKAQGSKKVDDYREAAVKVAEHFINSDDINRAQSTVDELT
AFTKQYGTSAHNKKVLEVMLPGSSIYDALEGRIPRASHTLTRLIEITETEEAERIKKEIN
ERRTRIGAKVGQVTVEVKREVFTNSDLENLYQQLINWSTDDEVRREYEEKLLQRAYDTLV
VLPLDQKAAKLDQVLTLAEGMVIIHHPFRLAWDLVLESRDMDDLKDLDAGILREYVALFE
KSGLARIFEGWLTSELSPFPPAPKAEGDEPVKEIAPEDRLLLFTEGLSDAEQSPFAHRLV
GDYYLHLEEHASAADTARNGLKVAQIESNKLGLGLQNTRDALNAVLGTSLVHHQAPRNHP
EAKRLFEDILQRKPKFTSALIGLGLILEETEDYQDAINFFLRALEEDKGNVRVGTELAWC
RALSSDYAQALKELEDFLQMMRADDPRTRDLRALTIYRIGVCLWESDTSKAARKDRNRGY
SRFLSAIKTNVNFAPAYTKLGIYYNDYAKDRKRARQCFQKAFELFAGEVEAAERLAQLFA
DQGDWDIVEVVAQRVVDSGKARPPPGSKKKGISWPYSALGVVQMNKQEYQQAIVSFLAAL
RISPDDYQSYVGLGESYHNSGRYNSALRTFTYALDPHDDTKLKINGETWFARYMLANVHR
ELGEFEEAESGLKSVLEERPSEFGVLMSLLQCYTEHAWRCVETGLFGQAVRCAISAVETA
VRVGKISPQAFNMWKSVGDACSIFTWVQNSINDFPSAEVQELLNTSAEQSMFEVLADVDL
VSLGSLDTDGTNDPASPPEPLVAAILAYKRAVRSASHDVHAQAVAWYNLGWAEQRAHASS
AAKAAKRYLTTAVRCFKRAIELEAGNPELWNALGVVTTTLNPKVAQHSFVRSLHLNELNA
KVWANLGVLYLLQNDIELAHQSFGRAQSTDPEYAHAWVGEGIIALMTGNTKEALNHFTHA
AEISDSASLITKRQYSVSSFDYLLSAEGASNDLTKIIQPIFALEQLRNQAPKDLPYRHLA
TLFLERVSNHVAAIETLTELSDTAEADYEASESLSALARYALAKSDLSRNQLATSDFSNA
AENAATALDLSSDADSSGLDAEARRKLRLSCHLTAGLAQYYLKDMPESVTMFKAALLESE
NDPDVVCSLVQVLWAQGGQDEKDVARQQLFDAAERHPEHIGVITLLGAIAALDNDTDTAN
AVRDDLLHLRTKEGVSSTSKDLQGIESLLAAIAGLFGGQNSEEALVTEAQTAILLKPDDS
QAWSQLAALSGEDHAAQMALKTAMQAVPPYGELEAGGLAQAFAGTGTVGDAQRAMFLAPW
EKEGWEAMRRALE
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgttggccaaggctgcgctcaaagcagcaaaacttgcgctcgacaacaagcagtatgac
ctggcaatcgagcacgcaaactcggtgctttgttcggatcctcaaaaccactttgcacgg
ctcttcttgggtcgagccctcgagaagcagggcaaatatgatgaggccgcgagcatatac
cactcagctgccaaggcaaagccagacgattcccaggcgtggcaagggctcgtgagtgtc
tacaaagctcaaggctcaaaaaaggtagacgattatcgcgaagcagcagtcaaggttgcg
gagcatttcatcaattccgatgacatcaaccgggcacagtcgactgtggatgagctcacg
gcttttaccaagcagtatggcacttcagcacataacaaaaaagtgcttgaggtgatgctg
ccaggaagctcaatttacgatgctttggagggacgtatacctcgtgcttcgcacacgctg
acgcggctcatcgaaatcaccgagacggaagaggcagaacgcatcaagaaggagattaac
gaacgccggacacgaataggcgcaaaagttggtcaagtcactgttgaagtgaagcgagaa
gtcttcacaaacagcgatcttgaaaacctgtaccagcaactgataaactggtcaactgac
gatgaggtccggcgggaatacgaagaaaagttgctacagcgtgcgtatgatacgctcgtt
gtgctgccactcgaccagaaagccgccaagcttgaccaggtcttgacgctcgcagagggc
atggtcatcatacatcatccttttcgccttgcttgggatctggtgctcgaatcgcgagac
atggatgatctgaaagacctggatgcgggtatattgcgcgaatatgttgcactcttcgag
aaatctggactcgcacgaattttcgaaggatggttgacgagtgaactttcgccatttcca
ccggcaccaaaagccgaaggagacgaacctgtgaaagagatcgctcctgaagatcgactt
ttgctgttcacggagggtctatcagatgccgagcaatcgcctttcgcgcaccgacttgtg
ggtgactattacctgcatttggaggagcatgcaagtgctgcggatacagccaggaacggg
cttaaggtcgctcagattgagagcaataagcttggtcttggtttgcaaaacacacgcgac
gctctcaatgctgtgctcgggacctctcttgttcatcatcaagcgccacgaaatcatccg
gaggcaaagcgactgttcgaggacattcttcaacggaagcccaagttcacttcagcactc
attggtctgggcctgattcttgaggagaccgaggactaccaggatgccatcaatttcttt
ttgcgagctcttgaagaagacaagggcaacgtgcgcgtgggtacggaacttgcttggtgt
agggcactaagcagcgactatgcacaggcgctcaaggaacttgaggacttcctgcagatg
atgagggctgatgacccgcgaacaagagacctccgtgcactgacaatatatcggattggc
gtttgtctttgggagtcggacacatccaaagctgcacgcaaggaccgtaatcgtggctac
agccgttttctgtccgcgatcaagacgaatgtcaacttcgcgcctgcgtacacaaagctc
ggcatatattacaacgattatgccaaagataggaaacgtgcccgccagtgcttccagaag
gcattcgagctctttgcgggagaagtcgaagccgcggaacgactggcacaactgttcgcc
gaccaaggagattgggatatcgtggaggtggttgcacagcgcgtcgttgactcagggaag
gcacggccgccgccagggtcgaagaagaagggcatcagctggccgtattctgcacttggt
gtcgtgcaaatgaacaagcaagaataccagcaagctatcgtatctttcctcgctgcgcta
cgaattagtcccgacgattaccagtcctatgtcggactgggtgaaagttaccacaactcc
ggcagatacaactccgcgttgaggaccttcacgtatgcactcgatccgcatgatgacacg
aagctcaaaatcaatggagagacatggttcgcccgatacatgctggccaatgttcacaga
gaacttggagagtttgaagaagcagaatctgggctgaagagtgtgctggaggaacgcccc
tcagaatttggtgtgctcatgtctttgcttcaatgctacactgagcatgcatggagatgt
gtagaaacgggtctcttcggccaagcagtgcgttgcgccatcagtgctgttgaaacggcc
gtgagagtgggcaagatttcaccgcaggccttcaacatgtggaagtcggtgggagatgca
tgctcaatctttacttgggtacaaaacagcatcaacgacttcccctcggccgaagtgcag
gaattgctcaacacatctgctgagcaaagcatgtttgaagttcttgccgacgttgatctg
gtgtctctgggttcgctcgataccgacggcacaaatgacccggcatcgcctccggagcct
ctcgtagcagcgattttggcatacaagagagcagttcgctcggcatctcacgatgtacac
gcccaggcagtggcttggtacaacctgggctgggcggagcagcgagctcatgccagcagt
gctgcaaaggccgcgaagcgctacctgaccaccgctgtcaggtgtttcaaacgcgccatc
gagcttgaggccgggaaccccgaactgtggaatgcccttggtgtggtcactacaacactg
aatccaaaggtagcacagcactcgttcgtgcgatctctccaccttaatgagctcaacgcc
aaagtgtgggcgaatctgggagttctgtatctgctacagaatgacattgaactcgctcat
caatcattcggccgagcacagagtactgatccggagtatgctcacgcatgggtcggcgag
ggaatcattgctctcatgaccggcaacacaaaagaagcattgaaccacttcacacacgct
gccgagatctcagattcagcttcgctcatcactaagcgccagtattctgtgtccagcttc
gactacctgctctcagcagagggtgcgtcgaacgacctcacaaaaatcatacagcccatt
ttcgcactcgagcagctacggaaccaagctcctaaggacctcccttaccgtcatctcgca
actttgttcctggaacgagttagtaaccacgttgccgccatcgagacattgacagaactc
agcgataccgcagaagcagactatgaagccagtgaatcactctcggcactggcacgatac
gcgctcgcgaaatccgatctttcaaggaatcaattagccacttcagacttttccaatgca
gcagagaacgccgcaacagccctcgacctctcctccgatgccgatagcagcggcctcgat
gcagaggccaggcgcaaattgcgactctcttgccacttgacagcaggtcttgcacagtac
tacctcaaagacatgcctgaaagcgttacgatgttcaaagccgctctcctagaaagcgaa
aacgacccagacgtcgtctgctctctcgtccaagtcctctgggcgcaaggcggacaagat
gaaaaagacgttgcgcgccagcagctcttcgatgcggcggagcgtcatcccgaacacatc
ggagtcattacactcctcggtgccatagctgcgcttgataacgatactgacacggcgaat
gctgtgcgagatgatttactacacctccgcacgaaagaaggtgtttcaagtaccagcaaa
gatttacaaggcattgaatctttgctggccgccatcgctggtctgtttggagggcagaac
tcagaagaggcacttgtgaccgaggcccagacagctattctgctcaaacctgatgattcc
caagcttggtcgcaacttgctgctttgtctggagaagaccatgctgcacagatggcttta
aagacagctatgcaggctgtgccgccatacggagagctagaggcgggtggtttggctcaa
gcttttgctggaacagggactgtgggagatgcacagcgagcgatgttcttggcgccctgg
gagaaagaaggttgggaggcgatgaggagagctttggagtga
DBGET
integrated database retrieval system
