Clostridium botulinum B Eklund 17B (NRP): CLL_A0477
Help
Entry
CLL_A0477 CDS
T00696
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cbk
Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLL_A0477 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbk03021
]
CLL_A0477 (rho)
03019 Messenger RNA biogenesis [BR:
cbk03019
]
CLL_A0477 (rho)
Transcription machinery [BR:
cbk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CLL_A0477 (rho)
Messenger RNA biogenesis [BR:
cbk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLL_A0477 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
AAA
AAA_14
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACD23395
UniProt:
B2TJX9
LinkDB
All DBs
Position
478609..480234
Genome browser
AA seq
541 aa
AA seq
DB search
MTKQVYEGMTLVELKDIAKKLEIKNISKYKKNELIDEILKKSPNTVEKEGVILREKISSK
VRNDNNSVSNTTNNKANFNNNTVNNTGFNNNNSSFNNNNSSFNNNSSNNNNSFNNGNRSF
NNSSNVSNIVNNNNSDNKVDSKNNEENPALKQEKLNNMINESNSAKGILEILENNNFGFL
RCKNYLTSSEDIYVSPSQIRRFNLRTGDEVQGKIREAKEGEKFKALLFVEKVNGEHPERA
IGRKYFETLTPIYPKERLRLETSDEKDLSSRLMDIICPIGKGQRGIIVAPPKAGKTTLLK
KVAQNISTNYPDIKLIVLLIDERPEEVTDMKRSINGEVIYSTFDEEPQNHAKVSRIVLER
AKRMVEQGKDVVILMDSITRLSRAYNLTITPTGRTLSGGLDPGALIMPKKFFGAARNIEE
GGSLTILATALVDTGSRMDDMIFEEFKGTGNMEVHLDRKLQERRIFPAIDIYKSGTRKED
LIFSKEEKDVAYTIRKVMYRDGNIEDVTENLIGMLSKTSDNKEFINVFKKVEFEKRRQNN
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaagcaagtatatgaaggcatgactttagttgaattaaaggatattgccaaaaaa
ttagagataaagaacatatcaaaatataaaaagaatgaattaatagatgaaatcttaaaa
aaatcacctaatacagtagaaaaagaaggtgttatattaagagaaaaaatatcttcaaaa
gtaagaaatgataataattctgttagtaatactactaacaataaggctaattttaacaat
aatactgtaaataatactggttttaataacaataatagtagctttaataataacaatagt
agttttaataataatagttctaataacaacaatagctttaataatggtaatagaagtttt
aataatagtagtaatgtaagcaatattgtaaataataataactcagataataaggttgat
tctaaaaataatgaggaaaatccagcattaaagcaagaaaagctaaataacatgataaat
gaatctaatagtgctaagggtattttagagatactagaaaacaataattttggtttttta
agatgcaaaaattatttaactagtagtgaagatatttatgtttcaccttctcaaattaga
agatttaatttaagaacaggtgatgaagtacaaggtaaaataagagaagcaaaagaagga
gaaaaatttaaagctcttttatttgttgaaaaggtaaatggtgaacatcctgaaagggca
ataggaagaaaatattttgaaacattaacaccaatttatcctaaagaaagattaagactt
gagacttctgatgaaaaggatttatcatcaaggcttatggatataatttgtcctataggt
aaagggcaaagaggaattatagtagccccacctaaagccggaaaaacaactttattaaaa
aaagtagcacaaaatatatctacaaattatcctgatataaagctaatagttcttcttata
gatgaaagaccggaagaagttacagatatgaagagatctataaacggagaagtaatatat
tcaacattcgatgaagaacctcaaaatcatgctaaggtatcaagaatagtgttggaaaga
gctaaaagaatggttgagcaaggtaaagatgttgtaattcttatggatagtataactaga
ttatcaagagcgtacaacctaacaataacaccaacaggcagaactttatcaggaggacta
gatccaggagcattgataatgcctaaaaagttctttggagctgcaagaaatattgaagag
ggtggaagtttaactattttagcaacagcacttgtagatacaggatctagaatggatgat
atgatatttgaagaatttaaaggaacaggaaatatggaagttcatcttgatagaaaacta
caagaaagaagaatattcccggctattgatatctataaatcgggaactagaaaagaagat
ctaatattctctaaagaagaaaaagatgtggcgtatacaataagaaaggttatgtataga
gatggaaatatagaagatgtaacagaaaatcttataggtatgctatccaaaacttcagat
aataaagaatttataaatgtatttaagaaagtagagtttgaaaaaagaagacaaaataac
aaatag
DBGET
integrated database retrieval system
